Variant report

Variant	rs1330336
Chromosome Location	chr9:72224110-72224111
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10123008	0.95[ASN][1000 genomes]
rs10746682	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10780539	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10867825	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10867828	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10867830	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11139511	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1411440	0.93[ASN][1000 genomes]
rs1854703	0.85[AFR][1000 genomes]
rs2026150	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2161056	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2309515	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4744918	0.84[AFR][1000 genomes]
rs7031694	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs986352	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs987653	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72215600-72235200	Weak transcription	Aorta	Aorta
2	chr9:72219600-72226000	Weak transcription	Liver	Liver
3	chr9:72219800-72242600	Weak transcription	Left Ventricle	heart
4	chr9:72221200-72237200	Weak transcription	Ovary	ovary
5	chr9:72223600-72224800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr9:72224000-72226200	Enhancers	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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