Variant report

Variant	rs13318397
Chromosome Location	chr3:23112642-23112643
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs1485384	0.90[ASN][1000 genomes]
rs6798275	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9821601	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9828558	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23105000-23121400	Weak transcription	Psoas Muscle	Psoas
2	chr3:23108400-23115600	Weak transcription	Fetal Lung	lung
3	chr3:23108800-23115800	Enhancers	Primary B cells from peripheral blood	blood
4	chr3:23109800-23113000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr3:23110000-23113200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr3:23110400-23113200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr3:23110400-23113200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr3:23110400-23119200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr3:23110400-23119400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr3:23111000-23119000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr3:23111400-23114200	Enhancers	Fetal Thymus	thymus
12	chr3:23111400-23114400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr3:23111600-23113000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr3:23111600-23115400	Enhancers	Primary hematopoietic stem cells	blood
15	chr3:23112000-23113200	Enhancers	GM12878-XiMat	blood
16	chr3:23112000-23114200	Enhancers	Dnd41	blood
17	chr3:23112000-23115000	Enhancers	Primary B cells from cord blood	blood
18	chr3:23112200-23112800	Enhancers	Adipose Nuclei	Adipose
19	chr3:23112200-23113600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr3:23112200-23115400	Enhancers	Primary monocytes fromperipheralblood	blood
21	chr3:23112400-23113000	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr3:23112400-23114400	Enhancers	Fetal Muscle Leg	muscle
23	chr3:23112600-23113000	Enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr3:23112600-23114200	Enhancers	HSMMtube	muscle
25	chr3:23112600-23114600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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