Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:151601718..151604425-chr5:151617166..151619276,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10043946	1.00[EUR][1000 genomes]
rs10055017	1.00[EUR][1000 genomes]
rs10055652	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10064138	1.00[EUR][1000 genomes]
rs10068083	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10069511	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10077195	0.87[AMR][1000 genomes]
rs1035960	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10515650	0.89[AMR][1000 genomes]
rs13356053	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13358035	0.87[AMR][1000 genomes]
rs1422927	1.00[EUR][1000 genomes]
rs17112860	1.00[EUR][1000 genomes]
rs17112916	1.00[EUR][1000 genomes]
rs17112920	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17112975	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17112976	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs1833760	1.00[EUR][1000 genomes]
rs1946487	1.00[EUR][1000 genomes]
rs2034583	1.00[EUR][1000 genomes]
rs28478867	1.00[EUR][1000 genomes]
rs28649615	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023828	chr5:151522149-151956217	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830519	chr5:151588627-151800192	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs13356620	FAM118A	trans	lymphoblastoid	seeQTL

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151616600-151617800	Enhancers	Monocytes-CD14+_RO01746	blood
2	chr5:151617000-151618000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr5:151617200-151617800	Enhancers	Primary neutrophils fromperipheralblood	blood

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