Variant report

Variant	rs13357143
Chromosome Location	chr5:148198505-148198506
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:148186231..148189148-chr5:148197237..148199113,2	K562	blood:

rs_ID	r²[population]
rs10078004	0.85[ASN][1000 genomes]
rs11168066	0.84[ASN][1000 genomes]
rs11168067	0.84[ASN][1000 genomes]
rs11168068	0.82[ASN][1000 genomes]
rs11746634	0.84[ASN][1000 genomes]
rs11958940	0.84[ASN][1000 genomes]
rs11959615	0.84[ASN][1000 genomes]
rs1432622	0.83[ASN][1000 genomes]
rs1432623	0.83[ASN][1000 genomes]
rs2053044	0.83[ASN][1000 genomes]
rs2082395	0.84[ASN][1000 genomes]
rs2400707	0.83[ASN][1000 genomes]
rs34064454	0.84[ASN][1000 genomes]
rs4705059	0.83[ASN][1000 genomes]
rs4705060	0.80[ASN][1000 genomes]
rs56330463	0.84[ASN][1000 genomes]
rs67339154	0.85[ASN][1000 genomes]
rs6878362	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9325120	0.84[ASN][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:148186400-148205400	Weak transcription	Aorta	Aorta
2	chr5:148189000-148204800	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr5:148189000-148205200	Weak transcription	Psoas Muscle	Psoas
4	chr5:148194600-148205200	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr5:148194600-148205200	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr5:148195000-148198600	Enhancers	Primary B cells from peripheral blood	blood
7	chr5:148195000-148205200	Weak transcription	Brain Substantia Nigra	brain
8	chr5:148195200-148205200	Weak transcription	Brain Cingulate Gyrus	brain
9	chr5:148195400-148205000	Weak transcription	Colon Smooth Muscle	Colon
10	chr5:148195400-148205200	Weak transcription	Brain Anterior Caudate	brain
11	chr5:148196600-148205200	Weak transcription	Right Atrium	heart
12	chr5:148197000-148198600	Enhancers	Brain Hippocampus Middle	brain
13	chr5:148197400-148204200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr5:148197400-148204200	Weak transcription	Adipose Nuclei	Adipose
15	chr5:148197600-148204800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr5:148197600-148205400	Weak transcription	Spleen	Spleen
17	chr5:148197800-148198800	Weak transcription	Primary hematopoietic stem cells	blood
18	chr5:148197800-148200200	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr5:148197800-148203600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr5:148198000-148199800	Weak transcription	Primary B cells from cord blood	blood
21	chr5:148198000-148203400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr5:148198200-148198600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr5:148198200-148198600	Enhancers	Stomach Smooth Muscle	stomach
24	chr5:148198400-148199000	Enhancers	Fetal Heart	heart
25	chr5:148198400-148199400	Enhancers	Skeletal Muscle Male	skeletal muscle

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