Variant report

Variant	rs13375694
Chromosome Location	chr1:220666914-220666915
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12562165	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12562172	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12562686	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs12563333	0.95[ASN][1000 genomes]
rs12563560	0.95[ASN][1000 genomes]
rs12568872	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12568969	0.82[JPT][hapmap]
rs17007981	1.00[JPT][hapmap]
rs1933881	0.82[JPT][hapmap]
rs57827085	0.82[ASN][1000 genomes]
rs6685446	0.82[JPT][hapmap]
rs7516373	1.00[CEU][hapmap];0.85[CHB][hapmap];0.82[JPT][hapmap]
rs7522502	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs7530302	1.00[CHB][hapmap];0.86[CHD][hapmap];0.82[JPT][hapmap]
rs7537705	0.95[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220666200-220667200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr1:220666400-220667000	Enhancers	Adipose Nuclei	Adipose
3	chr1:220666800-220667400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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