Variant report

Variant	rs1338765
Chromosome Location	chr1:220606232-220606233
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12046244	0.90[JPT][hapmap]
rs1338763	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1338764	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1953809	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3753873	0.87[JPT][hapmap]
rs3753874	0.86[JPT][hapmap]
rs4120669	0.81[JPT][hapmap]
rs4262550	0.84[EUR][1000 genomes]
rs60224244	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61354864	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6541154	0.82[JPT][hapmap]
rs6694188	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7555225	0.90[JPT][hapmap]
rs9430949	0.85[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220605000-220606800	Enhancers	Fetal Muscle Leg	muscle
2	chr1:220605200-220606600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:220605400-220609200	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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