Variant report

Variant	rs1338775
Chromosome Location	chr1:220613513-220613514
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10863556	0.91[AFR][1000 genomes]
rs12562165	0.82[JPT][hapmap];0.87[EUR][1000 genomes]
rs12562172	0.82[JPT][hapmap];0.87[EUR][1000 genomes]
rs12563333	0.87[EUR][1000 genomes]
rs12563560	0.87[EUR][1000 genomes]
rs12563619	0.96[EUR][1000 genomes]
rs12564062	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12568872	0.82[JPT][hapmap];0.87[EUR][1000 genomes]
rs12568969	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1338774	0.90[AFR][1000 genomes]
rs1338776	0.99[AFR][1000 genomes]
rs17007981	0.82[JPT][hapmap]
rs1933881	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4598492	0.94[AFR][1000 genomes]
rs55875950	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56659017	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57725868	0.96[EUR][1000 genomes]
rs60843898	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6669351	0.91[EUR][1000 genomes]
rs6685446	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6688366	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092253	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73092254	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73092256	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73092261	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73092264	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092269	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092271	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092272	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092273	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092281	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73092282	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74139652	0.96[EUR][1000 genomes]
rs74139653	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74139660	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74139668	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74139669	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7516373	1.00[JPT][hapmap]
rs7525770	0.87[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes]
rs7537705	0.87[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220606800-220614200	Weak transcription	Fetal Muscle Leg	muscle
2	chr1:220610000-220624000	Weak transcription	Fetal Heart	heart

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