The 2.0 version of rSNPBase

Variant report

Variant rs13393046
Chromosome Location chr2:55612805-55612806
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55510200-55616800 Weak transcription Fetal Intestine Small intestine
2 chr2:55542400-55644800 Weak transcription Primary T cells from cord blood blood
3 chr2:55555200-55635800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:55579200-55640800 Weak transcription Fetal Brain Male brain
5 chr2:55579400-55614400 Weak transcription Fetal Brain Female brain
6 chr2:55579400-55622400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr2:55579400-55644400 Weak transcription Primary B cells from cord blood blood
8 chr2:55579600-55632200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:55582000-55632400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:55582800-55615000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr2:55589400-55639400 Weak transcription Aorta Aorta
12 chr2:55589600-55628800 Weak transcription Fetal Thymus thymus
13 chr2:55589600-55632200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr2:55590400-55622400 Weak transcription GM12878-XiMat blood
15 chr2:55591000-55646000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:55592000-55635400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:55592200-55617600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr2:55592200-55631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:55592800-55615600 Weak transcription NHEK skin
20 chr2:55592800-55617800 Weak transcription A549 lung
21 chr2:55592800-55626600 Weak transcription Muscle Satellite Cultured Cells --
22 chr2:55592800-55635600 Weak transcription HSMMtube muscle
23 chr2:55593000-55622400 Weak transcription Brain Angular Gyrus brain
24 chr2:55593000-55622400 Weak transcription Brain Anterior Caudate brain
25 chr2:55593200-55632600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:55593400-55616400 Weak transcription HUVEC blood vessel
27 chr2:55593800-55631800 Weak transcription Brain Germinal Matrix brain
28 chr2:55598200-55616200 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:55599200-55626800 Weak transcription Osteobl bone
30 chr2:55600000-55617600 Weak transcription Fetal Muscle Leg muscle
31 chr2:55600600-55616200 Weak transcription Brain Hippocampus Middle brain
32 chr2:55600600-55617400 Weak transcription K562 blood
33 chr2:55600600-55617800 Weak transcription Fetal Lung lung
34 chr2:55600600-55631600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:55600800-55629400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:55600800-55629400 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr2:55601800-55631000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:55601800-55644600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr2:55602000-55618600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:55602000-55629600 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr2:55602200-55615600 Weak transcription Hela-S3 cervix
42 chr2:55602200-55629600 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr2:55602400-55617200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:55602400-55629600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr2:55603600-55629400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr2:55603600-55630200 Weak transcription NH-A brain
47 chr2:55603800-55613600 Weak transcription Thymus Thymus
48 chr2:55605800-55617800 Weak transcription HepG2 liver
49 chr2:55606200-55630400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:55607000-55615800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015