The 2.0 version of rSNPBase

Variant report

Variant rs13399143
Chromosome Location chr2:37539949-37539950
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37484600-37550400 Weak transcription Right Ventricle heart
2 chr2:37499400-37540200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr2:37502800-37543400 Weak transcription Esophagus oesophagus
4 chr2:37509000-37550800 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:37511000-37550800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:37513600-37543200 Weak transcription NHLF lung
7 chr2:37515800-37545400 Weak transcription Muscle Satellite Cultured Cells --
8 chr2:37516800-37545200 Weak transcription Fetal Kidney kidney
9 chr2:37517400-37542400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:37518800-37545400 Weak transcription NH-A brain
11 chr2:37519000-37549400 Weak transcription HSMM muscle
12 chr2:37519200-37543800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr2:37519200-37545600 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:37520200-37543400 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr2:37520200-37545400 Weak transcription Ovary ovary
16 chr2:37520200-37549600 Weak transcription Fetal Muscle Leg muscle
17 chr2:37520400-37549600 Weak transcription H1 Cell Line embryonic stem cell
18 chr2:37520400-37550400 Weak transcription Fetal Muscle Trunk muscle
19 chr2:37529200-37540200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr2:37529200-37540400 Weak transcription Brain Hippocampus Middle brain
21 chr2:37529400-37545600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:37529600-37545600 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr2:37529600-37545600 Weak transcription NHDF-Ad bronchial
24 chr2:37530400-37542600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr2:37530400-37548400 Weak transcription K562 blood
26 chr2:37530600-37542400 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr2:37530600-37542800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:37530600-37548200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr2:37530600-37550400 Weak transcription Thymus Thymus
30 chr2:37530800-37542400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr2:37530800-37542400 Weak transcription Dnd41 blood
32 chr2:37530800-37542600 Weak transcription Gastric stomach
33 chr2:37530800-37542800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr2:37530800-37542800 Weak transcription Fetal Stomach stomach
35 chr2:37530800-37548600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:37530800-37549600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr2:37531000-37543200 Weak transcription Fetal Thymus thymus
38 chr2:37531000-37548600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr2:37531600-37543400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:37533200-37550400 Weak transcription Fetal Intestine Large intestine
41 chr2:37533400-37544800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr2:37533800-37546000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr2:37533800-37549400 Weak transcription Fetal Intestine Small intestine
44 chr2:37534000-37550400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:37534400-37550400 Weak transcription Lung lung
46 chr2:37534400-37550600 Weak transcription Left Ventricle heart
47 chr2:37534600-37548400 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:37534800-37543200 Weak transcription HepG2 liver
49 chr2:37534800-37548400 Weak transcription A549 lung
50 chr2:37534800-37548800 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015