The 2.0 version of rSNPBase

Variant report

Variant rs13407101
Chromosome Location chr2:11901856-11901857
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11888400-11916400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11890400-11906400 Weak transcription Fetal Brain Male brain
3 chr2:11890600-11905800 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:11891400-11903000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:11893800-11906400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:11894200-11903000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:11894600-11904600 Weak transcription Fetal Intestine Small intestine
8 chr2:11894800-11903000 Weak transcription Aorta Aorta
9 chr2:11894800-11903200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:11895000-11902000 Weak transcription Left Ventricle heart
11 chr2:11895000-11902200 Weak transcription NHLF lung
12 chr2:11895000-11902600 Weak transcription Right Ventricle heart
13 chr2:11895000-11903000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:11895000-11903000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:11895000-11903000 Weak transcription Esophagus oesophagus
16 chr2:11895000-11903000 Weak transcription Fetal Stomach stomach
17 chr2:11895000-11903000 Weak transcription Stomach Smooth Muscle stomach
18 chr2:11895000-11903200 Weak transcription Fetal Muscle Leg muscle
19 chr2:11895000-11903400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr2:11895000-11903600 Weak transcription Liver Liver
21 chr2:11895000-11904400 Weak transcription Adipose Nuclei Adipose
22 chr2:11895000-11904400 Weak transcription Brain Cingulate Gyrus brain
23 chr2:11895000-11904400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:11895000-11904600 Weak transcription Muscle Satellite Cultured Cells --
25 chr2:11895000-11904600 Weak transcription Rectal Smooth Muscle rectum
26 chr2:11895000-11904600 Weak transcription Hela-S3 cervix
27 chr2:11895000-11905000 Weak transcription Gastric stomach
28 chr2:11895000-11905400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr2:11895000-11905800 Weak transcription Brain Angular Gyrus brain
30 chr2:11895000-11905800 Weak transcription HSMMtube muscle
31 chr2:11895000-11905800 Weak transcription NH-A brain
32 chr2:11895000-11905800 Weak transcription Osteobl bone
33 chr2:11895000-11906000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:11895000-11906200 Weak transcription HSMM muscle
35 chr2:11895000-11907000 Weak transcription Colon Smooth Muscle Colon
36 chr2:11895000-11918200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:11895200-11903800 Weak transcription HMEC breast
38 chr2:11895600-11903000 Weak transcription Colonic Mucosa Colon
39 chr2:11895600-11905600 Weak transcription Duodenum Mucosa Duodenum
40 chr2:11895800-11902800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:11895800-11903000 Weak transcription Lung lung
42 chr2:11895800-11904600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr2:11895800-11905600 Weak transcription NHDF-Ad bronchial
44 chr2:11895800-11905800 Weak transcription Spleen Spleen
45 chr2:11897400-11905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr2:11897600-11903400 Weak transcription Brain Hippocampus Middle brain
47 chr2:11897600-11909000 Weak transcription Psoas Muscle Psoas
48 chr2:11897800-11902800 Weak transcription Fetal Muscle Trunk muscle
49 chr2:11897800-11904400 Weak transcription Primary B cells from cord blood blood
50 chr2:11897800-11905000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015