Variant report

Variant	rs13418851
Chromosome Location	chr2:181913040-181913041
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:181850460..181852224-chr2:181912252..181913801,2	K562	blood:
2	chr2:181908962..181910563-chr2:181912843..181914506,2	K562	blood:
3	chr2:181906607..181910803-chr2:181912634..181916168,4	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10167039	1.00[CEU][hapmap]
rs10168243	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10172609	1.00[CEU][hapmap]
rs10177379	1.00[CEU][hapmap]
rs10179247	1.00[CEU][hapmap]
rs10190282	1.00[CEU][hapmap]
rs10206321	1.00[CEU][hapmap]
rs1040227	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11883509	0.89[ASN][1000 genomes]
rs13396254	1.00[CEU][hapmap]
rs13406825	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13409312	1.00[CEU][hapmap]
rs13418807	1.00[CEU][hapmap]
rs13420661	1.00[CEU][hapmap]
rs13425162	1.00[CEU][hapmap]
rs13425173	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13425730	1.00[CEU][hapmap]
rs13429008	1.00[CEU][hapmap]
rs2292855	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6706552	1.00[CEU][hapmap]
rs6721173	1.00[CEU][hapmap]
rs6722001	1.00[CEU][hapmap]
rs7355651	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181902200-181926400	Weak transcription	HSMM	muscle
2	chr2:181902800-181934200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr2:181903600-181918800	Weak transcription	NHEK	skin
4	chr2:181903800-181917000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr2:181903800-181934600	Weak transcription	NH-A	brain
6	chr2:181904200-181919200	Weak transcription	Osteobl	bone
7	chr2:181904400-181915600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr2:181904400-181934000	Weak transcription	NHDF-Ad	bronchial
9	chr2:181904400-181945400	Weak transcription	Left Ventricle	heart
10	chr2:181906400-181919400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr2:181907600-181917000	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr2:181910400-181916800	Weak transcription	Colon Smooth Muscle	Colon
13	chr2:181911000-181928400	Weak transcription	Fetal Lung	lung
14	chr2:181911800-181913400	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr2:181911800-181940400	Weak transcription	Primary T cells from cord blood	blood
16	chr2:181912000-181916800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr2:181912000-181917000	Weak transcription	GM12878-XiMat	blood
18	chr2:181912200-181917000	Weak transcription	Primary hematopoietic stem cells	blood
19	chr2:181912200-181917000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr2:181912200-181917000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr2:181912400-181941400	Weak transcription	Esophagus	oesophagus
22	chr2:181912600-181917000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr2:181912600-181928400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr2:181912800-181917000	Weak transcription	K562	blood
25	chr2:181912800-181917400	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr2:181913000-181922800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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