Variant report

Variant rs13422890
Chromosome Location chr2:127840748-127840749
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:127815200-127850800 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:127818400-127844400 Genic enhancers Fetal Muscle Leg muscle
3 chr2:127831600-127842600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr2:127834400-127849000 Bivalent Enhancer Placenta Placenta
5 chr2:127834600-127841600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:127834600-127848400 Enhancers Brain Angular Gyrus brain
7 chr2:127835000-127843800 Enhancers Stomach Mucosa stomach
8 chr2:127835000-127844800 Genic enhancers Fetal Intestine Small intestine
9 chr2:127835200-127841400 Enhancers Fetal Lung lung
10 chr2:127835200-127846000 Enhancers Fetal Intestine Large intestine
11 chr2:127835400-127843600 Enhancers Gastric stomach
12 chr2:127835400-127853200 Enhancers Primary hematopoietic stem cells blood
13 chr2:127836600-127841400 Enhancers Osteobl bone
14 chr2:127836600-127846000 Enhancers Lung lung
15 chr2:127836800-127841600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr2:127837400-127842000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr2:127837600-127844400 Weak transcription Ovary ovary
18 chr2:127838000-127842400 Flanking Active TSS Brain Substantia Nigra brain
19 chr2:127838000-127842600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:127838200-127841600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
21 chr2:127838200-127841600 Enhancers NH-A brain
22 chr2:127838200-127841800 Enhancers NHLF lung
23 chr2:127838200-127843200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
24 chr2:127838400-127841000 Enhancers Stomach Smooth Muscle stomach
25 chr2:127838600-127841400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:127839000-127845600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr2:127839200-127840800 Weak transcription HUVEC blood vessel
28 chr2:127839200-127841400 Enhancers Sigmoid Colon Sigmoid Colon
29 chr2:127839400-127840800 Enhancers Rectal Mucosa Donor 29 rectum
30 chr2:127839400-127841000 Enhancers Small Intestine intestine
31 chr2:127839400-127841200 Weak transcription A549 lung
32 chr2:127839400-127844400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:127839400-127844600 Enhancers Primary B cells from cord blood blood
34 chr2:127839400-127852800 Weak transcription Rectal Smooth Muscle rectum
35 chr2:127839600-127841000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr2:127839600-127841200 Enhancers Psoas Muscle Psoas
37 chr2:127839600-127841800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:127839600-127842800 Enhancers Duodenum Mucosa Duodenum
39 chr2:127839600-127843200 Enhancers Liver Liver
40 chr2:127839600-127843800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:127839600-127846000 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr2:127839600-127847800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr2:127839800-127841000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr2:127839800-127841400 Flanking Active TSS HSMMtube muscle
45 chr2:127839800-127841600 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr2:127839800-127844600 Enhancers Primary monocytes fromperipheralblood blood
47 chr2:127840000-127841400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:127840000-127841600 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr2:127840000-127841800 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr2:127840000-127842000 Enhancers Primary T cells from cord blood blood

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