Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10227915	0.99[ASN][1000 genomes]
rs10265404	0.89[AMR][1000 genomes]
rs10282049	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11514785	0.89[AMR][1000 genomes]
rs11981229	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17701573	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2074936	0.92[AMR][1000 genomes]
rs2237408	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2237410	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2237414	0.89[AMR][1000 genomes]
rs2299136	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2299138	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3800853	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4623320	0.89[ASN][1000 genomes]
rs55751785	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61105243	0.99[ASN][1000 genomes]
rs61543464	0.89[ASN][1000 genomes]
rs6979897	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7801145	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7807957	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021180	chr7:39424988-39642261	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39426000-39432800	Weak transcription	Fetal Muscle Leg	muscle

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