The 2.0 version of rSNPBase

Variant report

Variant rs13447569
Chromosome Location chr1:91992657-91992658
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:91967800-92009600 Weak transcription Thymus Thymus
2 chr1:91975000-91995200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:91977800-91995200 Weak transcription HMEC breast
4 chr1:91978800-91993400 Weak transcription Osteobl bone
5 chr1:91980600-91995800 Weak transcription HSMM muscle
6 chr1:91981000-91995200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:91983000-92002600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:91983200-91995400 Weak transcription Hela-S3 cervix
9 chr1:91983200-91995400 Weak transcription NHEK skin
10 chr1:91983400-91995000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:91983400-91995200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:91984400-91994000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:91984400-91998000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:91984600-91994400 Weak transcription Fetal Muscle Leg muscle
15 chr1:91984600-91995200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:91984600-91997800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:91985000-92000400 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:91987200-91993400 Weak transcription Colon Smooth Muscle Colon
19 chr1:91988600-91993200 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:91989200-91997800 Weak transcription Primary hematopoietic stem cells blood
21 chr1:91989400-91997200 Weak transcription GM12878-XiMat blood
22 chr1:91989400-92002800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:91989800-91995400 Weak transcription A549 lung
24 chr1:91990000-91999400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:91990800-91993600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:91990800-91995400 Enhancers NHDF-Ad bronchial
27 chr1:91990800-91998000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:91990800-91998000 Weak transcription Fetal Heart heart
29 chr1:91990800-92000800 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr1:91991000-91994600 Enhancers Fetal Stomach stomach
31 chr1:91991000-91995200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:91991000-91996400 Weak transcription Dnd41 blood
33 chr1:91991200-91994800 Weak transcription K562 blood
34 chr1:91991200-91997800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:91991400-91994800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:91991600-91993800 Enhancers NHLF lung
37 chr1:91991600-91996000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:91992200-91993600 Enhancers Adipose Nuclei Adipose
39 chr1:91992600-91993800 Enhancers Fetal Lung lung
40 chr1:91992600-91994000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:91992600-91994400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:91992600-91994600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015