Variant report

Variant	rs1355740
Chromosome Location	chr3:23070957-23070958
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1094607	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs115374	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13078875	0.80[AMR][1000 genomes]
rs1817581	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1849478	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2171030	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2359367	0.95[EUR][1000 genomes]
rs2688414	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs518725	0.86[EUR][1000 genomes]
rs582089	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs603056	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes]
rs6550719	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs683436	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs861983	0.80[AMR][1000 genomes]
rs9809876	0.81[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23068800-23071200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr3:23069400-23071200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
3	chr3:23069400-23071600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr3:23069400-23071600	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr3:23070000-23071600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr3:23070400-23071200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr3:23070400-23071200	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr3:23070400-23071600	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr3:23070400-23071600	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr3:23070800-23071000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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