Variant report

Variant rs1373228
Chromosome Location chr2:55871285-55871286
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55846800-55919800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:55847400-55911000 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:55847600-55886600 Weak transcription Stomach Mucosa stomach
4 chr2:55848000-55872600 Weak transcription Small Intestine intestine
5 chr2:55849200-55873200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:55849800-55882800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr2:55852000-55872400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:55853600-55882400 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr2:55857000-55873800 Strong transcription Fetal Thymus thymus
10 chr2:55858200-55920400 Weak transcription Fetal Heart heart
11 chr2:55858600-55871600 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr2:55858800-55873400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:55858800-55875600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:55858800-55877200 Strong transcription Dnd41 blood
15 chr2:55859000-55876800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:55859000-55877000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:55859000-55877200 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr2:55859200-55874000 Weak transcription Pancreas Pancrea
19 chr2:55859400-55875600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:55859400-55877600 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr2:55859800-55871400 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr2:55859800-55873200 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr2:55859800-55873600 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr2:55860400-55905400 Weak transcription Fetal Brain Male brain
25 chr2:55861800-55875000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr2:55861800-55875800 Strong transcription Primary monocytes fromperipheralblood blood
27 chr2:55862000-55873400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:55862000-55874800 Strong transcription Fetal Muscle Trunk muscle
29 chr2:55862000-55875000 Strong transcription Fetal Intestine Large intestine
30 chr2:55862000-55877200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr2:55862000-55877800 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr2:55862200-55871400 Strong transcription GM12878-XiMat blood
33 chr2:55862200-55873800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr2:55862200-55874000 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr2:55862200-55874400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr2:55862200-55874800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:55862600-55871600 Strong transcription Adipose Nuclei Adipose
38 chr2:55863400-55871400 Strong transcription Fetal Muscle Leg muscle
39 chr2:55863400-55871400 Strong transcription HepG2 liver
40 chr2:55863400-55875600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:55864000-55893200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr2:55864200-55882800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr2:55864400-55872400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr2:55864400-55919600 Weak transcription NHLF lung
45 chr2:55864600-55881400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:55864600-55881400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:55864800-55874800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr2:55864800-55879200 Weak transcription Primary hematopoietic stem cells blood
49 chr2:55865000-55880400 Weak transcription HMEC breast
50 chr2:55865600-55873400 Strong transcription Osteobl bone

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