The 2.0 version of rSNPBase

Variant report

Variant rs1380949
Chromosome Location chr11:46854392-46854393
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46848400-46856800 Weak transcription Small Intestine intestine
2 chr11:46848400-46863800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr11:46848400-46866200 Weak transcription Placenta Placenta
4 chr11:46848800-46854400 Weak transcription Placenta Amnion Placenta Amnion
5 chr11:46848800-46857600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr11:46848800-46862200 Weak transcription Fetal Muscle Trunk muscle
7 chr11:46848800-46865800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr11:46849000-46854400 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr11:46849000-46856400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr11:46849000-46856400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr11:46849000-46857000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr11:46849000-46857200 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr11:46849000-46858400 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr11:46849000-46865200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr11:46849000-46865200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr11:46849000-46865800 Weak transcription Primary hematopoietic stem cells blood
17 chr11:46849000-46865800 Weak transcription Thymus Thymus
18 chr11:46849000-46866200 Weak transcription Primary B cells from cord blood blood
19 chr11:46849000-46866200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr11:46849000-46867000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr11:46849200-46854400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr11:46849200-46859200 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr11:46849200-46859800 Weak transcription Primary T cells fromperipheralblood blood
24 chr11:46849200-46860000 Weak transcription Ovary ovary
25 chr11:46849200-46860800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr11:46849200-46861000 Weak transcription Fetal Thymus thymus
27 chr11:46849200-46863600 Weak transcription Fetal Muscle Leg muscle
28 chr11:46849200-46864400 Weak transcription Fetal Stomach stomach
29 chr11:46849200-46866000 Weak transcription NH-A brain
30 chr11:46849200-46866200 Weak transcription Brain Germinal Matrix brain
31 chr11:46849200-46866600 Weak transcription Psoas Muscle Psoas
32 chr11:46849600-46854400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr11:46849600-46860800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr11:46849600-46866000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr11:46849600-46866200 Weak transcription HSMM muscle
36 chr11:46849600-46866600 Weak transcription Brain Angular Gyrus brain
37 chr11:46849800-46857200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr11:46849800-46863000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr11:46850000-46854400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr11:46850000-46859400 Weak transcription GM12878-XiMat blood
41 chr11:46850000-46863600 Weak transcription HUVEC blood vessel
42 chr11:46850000-46866000 Weak transcription NHLF lung
43 chr11:46850000-46866600 Weak transcription Brain Inferior Temporal Lobe brain
44 chr11:46850200-46854400 Weak transcription HMEC breast
45 chr11:46850200-46857000 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr11:46850200-46857400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr11:46850200-46859200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr11:46850200-46862600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr11:46850200-46864000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr11:46850200-46864800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015