The 2.0 version of rSNPBase

Variant report

Variant rs1386585
Chromosome Location chr1:92715207-92715208
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92705600-92726800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:92705800-92729200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr1:92707200-92764000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:92708200-92741200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:92709000-92717400 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:92709000-92718800 Weak transcription Lung lung
7 chr1:92709000-92737200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:92709000-92762800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:92709200-92718800 Weak transcription Pancreas Pancrea
10 chr1:92709400-92735800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:92709600-92730800 Weak transcription Hela-S3 cervix
12 chr1:92710000-92717800 Weak transcription Brain Germinal Matrix brain
13 chr1:92710000-92737600 Weak transcription HSMM muscle
14 chr1:92710000-92745200 Weak transcription Brain Hippocampus Middle brain
15 chr1:92710200-92717400 Weak transcription Adipose Nuclei Adipose
16 chr1:92710200-92717800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:92710200-92717800 Weak transcription Placenta Placenta
18 chr1:92710200-92718000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:92710200-92718800 Weak transcription Left Ventricle heart
20 chr1:92710200-92718800 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:92710200-92739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:92710400-92718600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:92710400-92724800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:92710600-92718400 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:92710600-92718400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:92710600-92718600 Weak transcription Fetal Muscle Trunk muscle
27 chr1:92710600-92718800 Weak transcription Aorta Aorta
28 chr1:92710600-92718800 Weak transcription Fetal Intestine Small intestine
29 chr1:92710600-92718800 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:92710600-92719000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:92710600-92725000 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:92710600-92726000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:92710600-92726200 Weak transcription Right Ventricle heart
34 chr1:92710600-92726200 Weak transcription Stomach Smooth Muscle stomach
35 chr1:92710600-92726600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:92710600-92753200 Weak transcription Small Intestine intestine
37 chr1:92710600-92762000 Weak transcription Fetal Brain Male brain
38 chr1:92710600-92763400 Weak transcription Brain Angular Gyrus brain
39 chr1:92710600-92764000 Weak transcription Gastric stomach
40 chr1:92710800-92717800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:92710800-92718800 Weak transcription H1 Cell Line embryonic stem cell
42 chr1:92710800-92726800 Weak transcription NH-A brain
43 chr1:92711000-92717800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:92711000-92720600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:92711000-92721600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:92711000-92763600 Weak transcription HSMMtube muscle
47 chr1:92711200-92717800 Weak transcription Fetal Brain Female brain
48 chr1:92711200-92718400 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:92711200-92718400 Weak transcription Rectal Smooth Muscle rectum
50 chr1:92711200-92718600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015