| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1051087 |
chr10:51886486-52447295 |
Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
32 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv916214 |
chr10:51886486-52458983 |
Active TSS Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv918212 |
chr10:51886486-52465482 |
Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv469522 |
chr10:52276564-52447589 |
Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv482564 |
chr10:52276564-52447589 |
Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv895393 |
chr10:52413720-52530819 |
Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv948007 |
chr10:52414948-52500270 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv8662 |
chr10:52416662-52461079 |
Flanking Active TSS Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv1808218 |
chr10:52437788-52448303 |
Bivalent/Poised TSS Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv1035197 |
chr10:52446582-52622349 |
Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
