Variant report

Variant	rs138744749
Chromosome Location	chr7:127054760-127054761
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:127052734-127055199..7:127225864-127233104	Hela-S3	cervix:
2	7:126890676-126899918..7:127052734-127055199	H1-hESC	embryonic stem cell:	embryo
3	chr7:127047814..127051155-chr7:127051314..127054818,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000004059	Chromatin interaction
ENSG00000179603	Chromatin interaction
ENSG00000106328	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3328774	chr7:127054385-127054878	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	esv3476740	chr7:127054456-127054803	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
3	esv3476741	chr7:127054456-127054803	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127046600-127058400	Weak transcription	Pancreas	Pancrea
2	chr7:127051400-127058600	Enhancers	Primary B cells from peripheral blood	blood
3	chr7:127052400-127055600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr7:127052800-127058000	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr7:127053000-127056000	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr7:127053200-127055400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
7	chr7:127053200-127055400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr7:127053200-127056000	Enhancers	Primary hematopoietic stem cells	blood
9	chr7:127053600-127054800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
10	chr7:127053600-127055000	Enhancers	Duodenum Mucosa	Duodenum
11	chr7:127053600-127056200	Enhancers	Primary T cells fromperipheralblood	blood
12	chr7:127053800-127054800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr7:127053800-127054800	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr7:127053800-127055000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
15	chr7:127053800-127055200	Enhancers	Fetal Thymus	thymus
16	chr7:127054200-127055400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
17	chr7:127054400-127054800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr7:127054400-127054800	Enhancers	Primary T killer memory cells from peripheral blood	blood
19	chr7:127054400-127055200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
20	chr7:127054400-127055600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
21	chr7:127054600-127054800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
22	chr7:127054600-127054800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr7:127054600-127055000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
24	chr7:127054600-127055400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
25	chr7:127054600-127055400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
26	chr7:127054600-127055600	Enhancers	GM12878-XiMat	blood
27	chr7:127054600-127056800	Enhancers	Primary T cells from cord blood	blood
28	chr7:127054600-127058400	Enhancers	Primary B cells from cord blood	blood

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