Variant report

Variant	rs138810639
Chromosome Location	chr8:10456325-10456326
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030934	chr8:10065169-10561161	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv1022994	chr8:10190618-10660122	Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	nsv539466	chr8:10190618-10660122	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	nsv1025557	chr8:10216726-10555187	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
5	nsv917085	chr8:10237508-10828204	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
6	nsv610267	chr8:10268736-10526742	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
7	nsv610268	chr8:10331636-10486652	Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
8	nsv1025251	chr8:10343591-10488557	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
9	nsv1015932	chr8:10357101-10597856	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
10	nsv610269	chr8:10416017-10461484	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
11	nsv610271	chr8:10438796-10459203	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
12	nsv890351	chr8:10439902-10482372	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
13	nsv1031279	chr8:10448142-10501380	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
14	nsv1022682	chr8:10453091-10501380	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
15	nsv539467	chr8:10455842-10495689	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:10451800-10490000	Weak transcription	Right Atrium	heart
2	chr8:10453800-10457600	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr8:10454400-10457400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr8:10455200-10456400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr8:10455200-10456800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:10455200-10457000	Enhancers	Esophagus	oesophagus
7	chr8:10455200-10457200	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr8:10455200-10457400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr8:10455200-10457400	Enhancers	Ovary	ovary
10	chr8:10455400-10456400	Enhancers	Placenta Amnion	Placenta Amnion
11	chr8:10455400-10457000	Enhancers	HMEC	breast
12	chr8:10455600-10456400	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr8:10455600-10456400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr8:10455600-10456400	Enhancers	Rectal Smooth Muscle	rectum
15	chr8:10455600-10456400	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr8:10455600-10456600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr8:10455600-10456600	Enhancers	HUVEC	blood vessel
18	chr8:10455600-10456800	Enhancers	Duodenum Mucosa	Duodenum
19	chr8:10455600-10456800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
20	chr8:10455800-10456400	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr8:10455800-10456400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr8:10455800-10456400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr8:10455800-10456400	Flanking Active TSS	Hela-S3	cervix
24	chr8:10455800-10456600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr8:10455800-10456600	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr8:10455800-10456600	Enhancers	A549	lung
27	chr8:10455800-10456600	Enhancers	NH-A	brain
28	chr8:10455800-10456800	Bivalent Enhancer	HepG2	liver
29	chr8:10456000-10456400	Enhancers	Fetal Muscle Leg	muscle
30	chr8:10456000-10456400	Bivalent Enhancer	Fetal Stomach	stomach
31	chr8:10456000-10456600	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr8:10456200-10456400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr8:10456200-10456400	Enhancers	Spleen	Spleen
34	chr8:10456200-10456400	Flanking Active TSS	NHEK	skin
35	chr8:10456200-10456800	Enhancers	Liver	Liver

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