Variant report

Variant rs1390490
Chromosome Location chr1:152161354-152161355
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152154400-152161400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:152158200-152161400 Weak transcription NH-A brain
3 chr1:152160600-152162000 Weak transcription Hela-S3 cervix
4 chr1:152161000-152161400 Enhancers Fetal Heart heart
5 chr1:152161000-152161400 Flanking Bivalent TSS/Enh Fetal Lung lung
6 chr1:152161000-152162000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr1:152161000-152162200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:152161000-152162200 Active TSS Primary T cells from cord blood blood
9 chr1:152161000-152162200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr1:152161000-152162200 Active TSS Right Ventricle heart
11 chr1:152161000-152162600 Active TSS Stomach Smooth Muscle stomach
12 chr1:152161200-152161400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
13 chr1:152161200-152161400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
14 chr1:152161200-152161400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
15 chr1:152161200-152161400 Active TSS Primary T killer naive cells fromperipheralblood blood
16 chr1:152161200-152161400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:152161200-152161400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:152161200-152161400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:152161200-152161400 Active TSS Primary mononuclear cells fromperipheralblood Blood
20 chr1:152161200-152161400 Active TSS Adipose Nuclei Adipose
21 chr1:152161200-152161400 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
22 chr1:152161200-152161400 Flanking Active TSS Duodenum Mucosa Duodenum
23 chr1:152161200-152161400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
24 chr1:152161200-152161400 Enhancers Gastric stomach
25 chr1:152161200-152161400 Active TSS Spleen Spleen
26 chr1:152161200-152161400 Enhancers HMEC breast
27 chr1:152161200-152161600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
28 chr1:152161200-152161600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:152161200-152161600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:152161200-152161600 Active TSS Liver Liver
31 chr1:152161200-152161600 Flanking Bivalent TSS/Enh Stomach Mucosa stomach
32 chr1:152161200-152161800 Flanking Active TSS Primary B cells from cord blood blood
33 chr1:152161200-152161800 Active TSS Primary T killer memory cells from peripheral blood blood
34 chr1:152161200-152161800 Active TSS Colonic Mucosa Colon
35 chr1:152161200-152161800 Enhancers Fetal Brain Male brain
36 chr1:152161200-152161800 Flanking Bivalent TSS/Enh Placenta Placenta
37 chr1:152161200-152161800 Active TSS Pancreas Pancrea
38 chr1:152161200-152161800 Active TSS NHEK skin
39 chr1:152161200-152162000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:152161200-152162000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:152161200-152162000 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
42 chr1:152161200-152162000 Bivalent/Poised TSS Primary neutrophils fromperipheralblood blood
43 chr1:152161200-152162000 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
44 chr1:152161200-152162000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chr1:152161200-152162000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:152161200-152162000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:152161200-152162000 Active TSS Muscle Satellite Cultured Cells --
48 chr1:152161200-152162000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:152161200-152162000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:152161200-152162000 Active TSS Aorta Aorta

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