Variant report

Variant rs1414367
Chromosome Location chr1:93647106-93647107
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93642200-93647200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:93642600-93647800 Active TSS K562 blood
3 chr1:93642800-93647200 Active TSS Pancreatic Islets Pancreatic Islet
4 chr1:93643000-93647600 Active TSS NHLF lung
5 chr1:93643000-93648400 Active TSS GM12878-XiMat blood
6 chr1:93643200-93647400 Active TSS A549 lung
7 chr1:93643200-93647600 Active TSS HMEC breast
8 chr1:93643400-93647200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:93643600-93647200 Active TSS H1 Cell Line embryonic stem cell
10 chr1:93643600-93647200 Active TSS H9 Cell Line embryonic stem cell
11 chr1:93643600-93647400 Active TSS iPS-18 Cell Line embryonic stem cell
12 chr1:93643600-93647600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:93643600-93647800 Active TSS iPS-15b Cell Line embryonic stem cell
14 chr1:93643800-93647200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:93643800-93647200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:93643800-93647200 Active TSS Colonic Mucosa Colon
17 chr1:93644000-93647800 Active TSS ES-I3 Cell Line embryonic stem cell
18 chr1:93644200-93647200 Active TSS HUES6 Cell Line embryonic stem cell
19 chr1:93644200-93647200 Active TSS Primary T regulatory cells fromperipheralblood blood
20 chr1:93644200-93647200 Active TSS Fetal Intestine Large intestine
21 chr1:93644200-93647200 Active TSS Fetal Kidney kidney
22 chr1:93644200-93647200 Active TSS HSMMtube muscle
23 chr1:93644200-93648000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:93644400-93647200 Active TSS Brain Anterior Caudate brain
25 chr1:93644400-93647200 Active TSS Rectal Smooth Muscle rectum
26 chr1:93644400-93648000 Active TSS HUES48 Cell Line embryonic stem cell
27 chr1:93644400-93648000 Active TSS HUES64 Cell Line embryonic stem cell
28 chr1:93644600-93647200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:93644600-93647200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr1:93644600-93647200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
31 chr1:93644600-93647200 Active TSS Fetal Heart heart
32 chr1:93644600-93647400 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr1:93644600-93647400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:93644600-93647600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:93644800-93647200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:93644800-93647200 Active TSS Fetal Muscle Trunk muscle
37 chr1:93644800-93647200 Active TSS Rectal Mucosa Donor 31 rectum
38 chr1:93644800-93647400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:93645800-93647200 Active TSS Primary T cells fromperipheralblood blood
40 chr1:93646000-93647200 Active TSS Primary mononuclear cells fromperipheralblood Blood
41 chr1:93646000-93647200 Active TSS Duodenum Smooth Muscle Duodenum
42 chr1:93646400-93647200 Active TSS Fetal Brain Male brain
43 chr1:93646400-93647400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:93646600-93647200 Active TSS Brain Germinal Matrix brain
45 chr1:93646600-93647200 Enhancers Colon Smooth Muscle Colon
46 chr1:93646600-93647200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
47 chr1:93646600-93647200 Flanking Active TSS Fetal Intestine Small intestine
48 chr1:93646600-93647400 Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr1:93646600-93647600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:93646600-93660400 Weak transcription Lung lung

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