Variant report

Variant	rs142102579
Chromosome Location	chr7:102615221-102615222
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:16)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:16 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAZ	chr7:102615025-102615790	K562	blood:	n/a	n/a
2	REST	chr7:102615016-102615424	K562	blood:	n/a	n/a
3	POLR2A	chr7:102614734-102615635	K562	blood:	n/a	n/a
4	YY1	chr7:102615067-102615380	K562	blood:	n/a	n/a
5	IRF1	chr7:102615206-102615692	K562	blood:	n/a	n/a
6	CBX3	chr7:102615174-102615822	K562	blood:	n/a	n/a
7	POLR2A	chr7:102615170-102615724	K562	blood:	n/a	n/a
8	NR2F2	chr7:102613345-102616007	K562	blood:	n/a	n/a
9	POLR2A	chr7:102614981-102615729	K562	blood:	n/a	n/a
10	TEAD4	chr7:102614720-102615994	K562	blood:	n/a	n/a
11	POLR2A	chr7:102614755-102615714	K562	blood:	n/a	n/a
12	POLR2A	chr7:102614740-102616726	K562	blood:	n/a	n/a
13	CHD2	chr7:102615129-102615353	K562	blood:	n/a	n/a
14	HEY1	chr7:102614741-102615779	K562	blood:	n/a	n/a
15	POLR2A	chr7:102614955-102615674	K562	blood:	n/a	n/a
16	YY1	chr7:102614958-102615713	K562	blood:	n/a	chr7:102615558-102615570

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:102451931..102453738-chr7:102614138..102615717,2	K562	blood:
2	chr7:102452440..102454909-chr7:102615064..102617723,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016563	chr7:101912320-102695860	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
2	nsv1028438	chr7:101912320-102704135	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
3	nsv868996	chr7:102332827-102991361	ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
4	esv2752138	chr7:102358320-102787135	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
5	nsv464667	chr7:102486254-102624192	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
6	nsv608060	chr7:102486254-102624192	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
7	nsv5881	chr7:102610488-102655699	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	esv3366768	chr7:102613816-102618977	Enhancers Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
9	esv11760	chr7:102614464-102617348	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102591000-102619400	Weak transcription	HSMM	muscle
2	chr7:102608800-102618600	Weak transcription	Osteobl	bone
3	chr7:102613000-102625600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:102613200-102631200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr7:102613600-102615800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
6	chr7:102613800-102615600	Enhancers	HUVEC	blood vessel
7	chr7:102613800-102617000	Weak transcription	Fetal Stomach	stomach
8	chr7:102613800-102618600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:102614200-102618600	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr7:102614200-102618800	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr7:102615000-102618000	Transcr. at gene 5' and 3'	K562	blood
12	chr7:102615200-102615400	Enhancers	H1 Cell Line	embryonic stem cell
13	chr7:102615200-102615600	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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