The 2.0 version of rSNPBase

Variant report

Variant rs142879371
Chromosome Location chr9:72086456-72086457
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72077200-72086800 Weak transcription Fetal Brain Male brain
2 chr9:72079000-72091600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:72080400-72089400 Weak transcription Fetal Thymus thymus
4 chr9:72081200-72087000 Weak transcription Fetal Muscle Trunk muscle
5 chr9:72081600-72090600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr9:72082000-72091000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr9:72082200-72090600 Weak transcription Fetal Lung lung
8 chr9:72082200-72091000 Weak transcription Fetal Stomach stomach
9 chr9:72082400-72090200 Weak transcription Spleen Spleen
10 chr9:72082400-72091200 Weak transcription Brain Hippocampus Middle brain
11 chr9:72082600-72086600 Weak transcription Fetal Brain Female brain
12 chr9:72082800-72088000 Enhancers Liver Liver
13 chr9:72082800-72091000 Weak transcription Esophagus oesophagus
14 chr9:72082800-72091400 Weak transcription Brain Germinal Matrix brain
15 chr9:72083000-72087800 Weak transcription Brain Cingulate Gyrus brain
16 chr9:72083000-72088200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr9:72083000-72089800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr9:72083000-72091000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr9:72083200-72087200 Weak transcription Brain Angular Gyrus brain
20 chr9:72084400-72087000 Enhancers Stomach Mucosa stomach
21 chr9:72084400-72087600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr9:72085000-72086800 Enhancers Duodenum Mucosa Duodenum
23 chr9:72085600-72087600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr9:72085600-72088000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr9:72085800-72087200 Enhancers HUVEC blood vessel
26 chr9:72086000-72087000 Weak transcription Fetal Intestine Small intestine
27 chr9:72086000-72088800 Weak transcription Aorta Aorta
28 chr9:72086000-72089000 Weak transcription Ovary ovary
29 chr9:72086000-72089400 Weak transcription Pancreas Pancrea
30 chr9:72086000-72090000 Weak transcription Gastric stomach
31 chr9:72086200-72086600 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr9:72086200-72086600 Enhancers Muscle Satellite Cultured Cells --
33 chr9:72086200-72086600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr9:72086200-72086600 Enhancers NH-A brain
35 chr9:72086200-72086800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr9:72086200-72087400 Weak transcription Fetal Intestine Large intestine
37 chr9:72086200-72087800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:72086200-72087800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr9:72086400-72086600 Enhancers H9 Cell Line embryonic stem cell
40 chr9:72086400-72087400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr9:72086400-72087600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr9:72086400-72087600 Weak transcription Small Intestine intestine
43 chr9:72086400-72090800 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015