Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:72207158..72209032-chr9:72218092..72220343,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM189A2-4	chr9:72217920-72219395	predAs_engstrom06_BM705037_1

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893437	chr9:72118962-72223176	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3425590	chr9:72217232-72221730	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72207800-72220200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr9:72209200-72219600	Weak transcription	Gastric	stomach
3	chr9:72212000-72219200	Weak transcription	Liver	Liver
4	chr9:72215000-72219600	Weak transcription	Right Ventricle	heart
5	chr9:72215000-72220200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr9:72215200-72219600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr9:72215200-72221000	Weak transcription	Right Atrium	heart
8	chr9:72215400-72219200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr9:72215600-72235200	Weak transcription	Aorta	Aorta
10	chr9:72215800-72218400	Enhancers	HUVEC	blood vessel
11	chr9:72217200-72221200	Enhancers	Ovary	ovary
12	chr9:72217400-72218200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr9:72217400-72218200	Enhancers	Fetal Brain Female	brain
14	chr9:72217400-72218400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr9:72217600-72218200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr9:72217600-72218200	Enhancers	Fetal Muscle Leg	muscle
17	chr9:72217600-72218400	Enhancers	Adipose Nuclei	Adipose
18	chr9:72217600-72218400	Enhancers	Fetal Lung	lung
19	chr9:72217600-72219200	Weak transcription	Fetal Brain Male	brain
20	chr9:72217800-72218200	Enhancers	Fetal Heart	heart
21	chr9:72218000-72218200	Enhancers	Pancreas	Pancrea
22	chr9:72218000-72218200	Enhancers	Spleen	Spleen

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