The 2.0 version of rSNPBase

Variant report

Variant rs145426537
Chromosome Location chr15:56174687-56174688
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56149000-56177600 Weak transcription Spleen Spleen
2 chr15:56153000-56174800 Weak transcription Fetal Intestine Small intestine
3 chr15:56153000-56176400 Weak transcription Esophagus oesophagus
4 chr15:56153600-56178600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr15:56155400-56174800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr15:56155400-56175600 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr15:56158200-56176400 Weak transcription Left Ventricle heart
8 chr15:56161200-56179800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr15:56161400-56177400 Weak transcription Duodenum Mucosa Duodenum
10 chr15:56165600-56174800 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr15:56166000-56185400 Weak transcription Hela-S3 cervix
12 chr15:56167800-56176200 Weak transcription Psoas Muscle Psoas
13 chr15:56171400-56177600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:56171600-56175600 Weak transcription Aorta Aorta
15 chr15:56171800-56176400 Weak transcription HUVEC blood vessel
16 chr15:56172000-56177200 Weak transcription Fetal Stomach stomach
17 chr15:56172000-56177600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr15:56172000-56186200 Weak transcription Osteobl bone
19 chr15:56172800-56176400 Weak transcription Stomach Smooth Muscle stomach
20 chr15:56172800-56176800 Weak transcription Pancreas Pancrea
21 chr15:56172800-56189600 Weak transcription Placenta Placenta
22 chr15:56173200-56175600 Weak transcription Right Ventricle heart
23 chr15:56173400-56174800 Enhancers Skeletal Muscle Male skeletal muscle
24 chr15:56174000-56175600 Genic enhancers A549 lung
25 chr15:56174200-56175000 Strong transcription Liver Liver
26 chr15:56174200-56177400 Enhancers Skeletal Muscle Female skeletal muscle
27 chr15:56174400-56174800 ZNF genes & repeats Lung lung
28 chr15:56174400-56175000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr15:56174400-56175000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr15:56174400-56175000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr15:56174400-56175200 Strong transcription Muscle Satellite Cultured Cells --
32 chr15:56174400-56175600 Strong transcription HSMMtube muscle
33 chr15:56174400-56175600 Strong transcription NHEK skin
34 chr15:56174400-56175800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr15:56174400-56175800 Strong transcription HSMM muscle
36 chr15:56174400-56177800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr15:56174600-56175400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr15:56174600-56175400 Strong transcription Primary T cells from cord blood blood
39 chr15:56174600-56175400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr15:56174600-56175600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:56174600-56175800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr15:56174600-56176000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr15:56174600-56181000 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015