Variant report

Variant	rs145789338
Chromosome Location	chr2:210997093-210997094
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431969	chr2:210682494-211074494	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv1004426	chr2:210709999-211001680	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	esv1795338	chr2:210758078-211098113	Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
4	esv1802749	chr2:210905194-211255611	Strong transcription ZNF genes & repeats Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
5	nsv875766	chr2:210996084-211033176	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210965000-211009800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr2:210978000-211010600	Weak transcription	Small Intestine	intestine
3	chr2:210978200-211009600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr2:210979200-211005000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr2:210981400-211009600	Weak transcription	Pancreas	Pancrea
6	chr2:210981400-211009800	Weak transcription	Gastric	stomach
7	chr2:210981600-211009600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr2:210982200-211001800	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr2:210983600-211009600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr2:210989200-211010000	Weak transcription	Osteobl	bone
11	chr2:210990400-211010000	Weak transcription	Brain Cingulate Gyrus	brain
12	chr2:210990600-211018200	Weak transcription	Fetal Heart	heart
13	chr2:210991000-210997400	Weak transcription	Primary T helper cells PMA-I stimulated	--
14	chr2:210991000-211009600	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr2:210991000-211010000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr2:210991000-211010400	Weak transcription	Fetal Brain Male	brain
17	chr2:210991000-211018200	Weak transcription	Colon Smooth Muscle	Colon
18	chr2:210991400-211009800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
19	chr2:210991400-211018200	Weak transcription	HSMMtube	muscle
20	chr2:210991800-210999000	Weak transcription	Fetal Muscle Leg	muscle
21	chr2:210991800-211011600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr2:210992200-211010000	Weak transcription	Primary T helper cells fromperipheralblood	blood
23	chr2:210992400-211015000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr2:210992600-211009600	Weak transcription	Aorta	Aorta
25	chr2:210992600-211009600	Weak transcription	Fetal Stomach	stomach
26	chr2:210992600-211009600	Weak transcription	Stomach Smooth Muscle	stomach
27	chr2:210992800-210999200	Weak transcription	Primary B cells from cord blood	blood
28	chr2:210992800-211008600	Weak transcription	Primary hematopoietic stem cells	blood
29	chr2:210992800-211008600	Weak transcription	Fetal Lung	lung
30	chr2:210992800-211009600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr2:210993000-210999600	Weak transcription	Fetal Brain Female	brain
32	chr2:210993000-211006000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr2:210993000-211009600	Weak transcription	Thymus	Thymus
34	chr2:210993400-210998800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr2:210993400-211001400	Weak transcription	Fetal Intestine Large	intestine
36	chr2:210993400-211009400	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr2:210993400-211009600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr2:210993400-211009600	Weak transcription	Adipose Nuclei	Adipose
39	chr2:210993400-211010000	Weak transcription	Brain Hippocampus Middle	brain
40	chr2:210994000-211000400	Weak transcription	Fetal Kidney	kidney
41	chr2:210994000-211005200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr2:210994000-211009000	Weak transcription	Fetal Thymus	thymus
43	chr2:210994000-211009200	Weak transcription	Liver	Liver
44	chr2:210994000-211009400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr2:210994000-211009400	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr2:210994000-211009600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr2:210994000-211009600	Weak transcription	Ovary	ovary
48	chr2:210994000-211009600	Weak transcription	Monocytes-CD14+_RO01746	blood
49	chr2:210994000-211009800	Weak transcription	Brain Angular Gyrus	brain
50	chr2:210994000-211009800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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