Variant report

Variant	rs146482603
Chromosome Location	chr7:104524731-104524732
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:104523544..104525271-chr7:104558660..104559768,6	MCF-7	breast:
2	chr7:104523873..104524762-chr7:104976177..104976740,2	K562	blood:
3	chr7:104523003..104525584-chr7:105230453..105233041,2	K562	blood:
4	chr7:104523014..104525633-chr7:104652582..104654103,2	MCF-7	breast:
5	chr7:104523347..104526293-chr7:104526937..104529454,4	K562	blood:
6	chr7:104523942..104525943-chr7:104535712..104537774,2	K562	blood:
7	chr7:104524458..104526068-chr7:104657025..104659232,2	K562	blood:
8	chr7:104523788..104524761-chr7:104558250..104559942,9	K562	blood:

No data

Variant related genes	Relation type
ENSG00000185055	Chromatin interaction
ENSG00000228393	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831086	chr7:104422503-104596766	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv981792	chr7:104524351-104538104	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104523600-104524800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:104523600-104524800	Enhancers	Primary hematopoietic stem cells	blood
3	chr7:104523600-104524800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr7:104523600-104524800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr7:104523600-104524800	Enhancers	Fetal Kidney	kidney
6	chr7:104523800-104524800	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr7:104523800-104524800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr7:104523800-104524800	Flanking Active TSS	K562	blood
9	chr7:104523800-104524800	Enhancers	Osteobl	bone
10	chr7:104523800-104525000	Enhancers	Fetal Stomach	stomach
11	chr7:104523800-104526600	Enhancers	Fetal Muscle Leg	muscle
12	chr7:104524000-104524800	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr7:104524000-104524800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr7:104524000-104524800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr7:104524000-104524800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr7:104524000-104524800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr7:104524000-104524800	Flanking Active TSS	Brain Hippocampus Middle	brain
18	chr7:104524000-104524800	Enhancers	Brain Inferior Temporal Lobe	brain
19	chr7:104524000-104524800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
20	chr7:104524000-104524800	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr7:104524000-104524800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
22	chr7:104524000-104524800	Enhancers	HMEC	breast
23	chr7:104524000-104524800	Enhancers	NH-A	brain
24	chr7:104524000-104524800	Enhancers	NHDF-Ad	bronchial
25	chr7:104524000-104524800	Enhancers	NHLF	lung
26	chr7:104524000-104525000	Enhancers	Placenta	Placenta
27	chr7:104524000-104525400	Enhancers	Brain Substantia Nigra	brain
28	chr7:104524000-104525400	Enhancers	Fetal Lung	lung
29	chr7:104524200-104524800	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr7:104524200-104524800	Enhancers	Lung	lung
31	chr7:104524200-104524800	Enhancers	Psoas Muscle	Psoas
32	chr7:104524200-104525000	Enhancers	Primary monocytes fromperipheralblood	blood
33	chr7:104524200-104525000	Enhancers	Liver	Liver
34	chr7:104524200-104525000	Enhancers	Fetal Muscle Trunk	muscle
35	chr7:104524200-104531800	Weak transcription	Cortex derived primary cultured neurospheres	brain
36	chr7:104524400-104524800	Enhancers	H1 Cell Line	embryonic stem cell
37	chr7:104524400-104524800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr7:104524400-104524800	Enhancers	iPS-18 Cell Line	embryonic stem cell
39	chr7:104524400-104524800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr7:104524400-104524800	Flanking Active TSS	Adipose Nuclei	Adipose
41	chr7:104524400-104524800	Flanking Active TSS	Brain Anterior Caudate	brain
42	chr7:104524400-104524800	Flanking Active TSS	Colonic Mucosa	Colon
43	chr7:104524400-104524800	Flanking Active TSS	Colon Smooth Muscle	Colon
44	chr7:104524400-104524800	Flanking Active TSS	Duodenum Mucosa	Duodenum
45	chr7:104524400-104524800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
46	chr7:104524400-104524800	Flanking Active TSS	Fetal Intestine Large	intestine
47	chr7:104524400-104524800	Flanking Active TSS	Fetal Intestine Small	intestine
48	chr7:104524400-104524800	Enhancers	Fetal Thymus	thymus
49	chr7:104524400-104524800	Enhancers	Gastric	stomach
50	chr7:104524400-104524800	Enhancers	Left Ventricle	heart

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