Variant report

Variant	rs147946213
Chromosome Location	chr6:80918740-80918741
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:80602215..80604082-chr6:80917282..80919253,2	K562	blood:
2	chr6:80918332..80920585-chr6:80923073..80926052,2	MCF-7	breast:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830708	chr6:80844283-80996876	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1034096	chr6:80856135-81150170	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv886309	chr6:80880138-80959885	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv886310	chr6:80880138-81025879	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv932996	chr6:80880896-81134991	Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv497995	chr6:80883701-81134991	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
7	nsv1033452	chr6:80888667-81000213	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	esv3369238	chr6:80918603-80919090	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:80878000-80921000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:80882400-80935400	Weak transcription	Dnd41	blood
3	chr6:80885800-80919000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr6:80891600-80931200	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr6:80896200-80921000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:80896400-80927400	Weak transcription	Aorta	Aorta
7	chr6:80896400-80943800	Weak transcription	Right Ventricle	heart
8	chr6:80897800-80918800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr6:80904200-80921800	Weak transcription	Fetal Thymus	thymus
10	chr6:80905000-80919000	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr6:80905600-80923800	Weak transcription	Small Intestine	intestine
12	chr6:80907400-80919800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr6:80907400-80920400	Weak transcription	Gastric	stomach
14	chr6:80907600-80920400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:80907600-80920400	Weak transcription	NHDF-Ad	bronchial
16	chr6:80907800-80919800	Weak transcription	Rectal Smooth Muscle	rectum
17	chr6:80907800-80920400	Weak transcription	Stomach Smooth Muscle	stomach
18	chr6:80907800-80920600	Weak transcription	HSMM	muscle
19	chr6:80907800-80920800	Weak transcription	Pancreas	Pancrea
20	chr6:80907800-80921000	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr6:80908000-80920400	Weak transcription	Fetal Muscle Leg	muscle
22	chr6:80908000-80920400	Weak transcription	HSMMtube	muscle
23	chr6:80908000-80936200	Weak transcription	Fetal Lung	lung
24	chr6:80909000-80920400	Weak transcription	Left Ventricle	heart
25	chr6:80909000-80920400	Weak transcription	Psoas Muscle	Psoas
26	chr6:80909000-80940200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr6:80910000-80933400	Weak transcription	Esophagus	oesophagus
28	chr6:80911200-80924200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr6:80911400-80919400	Weak transcription	GM12878-XiMat	blood
30	chr6:80911400-80920000	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr6:80911800-80935200	Weak transcription	Rectal Mucosa Donor 29	rectum
32	chr6:80912000-80921000	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr6:80913400-80919400	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr6:80913400-80923200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr6:80913600-80919800	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr6:80913800-80920600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr6:80914000-80920000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr6:80914000-80920400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr6:80914600-80980400	Weak transcription	Ovary	ovary
40	chr6:80914800-80921000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr6:80914800-80929000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr6:80914800-80934400	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr6:80914800-80938400	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr6:80914800-80938600	Weak transcription	Liver	Liver
45	chr6:80915200-80921000	Weak transcription	Primary B cells from cord blood	blood
46	chr6:80915400-80920200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr6:80915400-80938200	Weak transcription	Primary T cells from cord blood	blood
48	chr6:80915400-80942000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
49	chr6:80915800-80920000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr6:80915800-80920400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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