Variant report

Variant	rs1485384
Chromosome Location	chr3:23118908-23118909
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:23117260..23119971-chr3:23124072..23125615,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs13318397	0.90[ASN][1000 genomes]
rs9821601	0.85[AFR][1000 genomes]
rs9828558	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520551	chr3:23115291-23120060	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23105000-23121400	Weak transcription	Psoas Muscle	Psoas
2	chr3:23110400-23119200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr3:23110400-23119400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr3:23111000-23119000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr3:23113600-23119400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:23115000-23121400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr3:23115200-23119400	Enhancers	HSMMtube	muscle
8	chr3:23115800-23121000	Weak transcription	Primary B cells from peripheral blood	blood
9	chr3:23117200-23121000	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr3:23117200-23121400	Weak transcription	Fetal Kidney	kidney
11	chr3:23117400-23121400	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr3:23117400-23121400	Weak transcription	Stomach Smooth Muscle	stomach
13	chr3:23117600-23121400	Weak transcription	Colon Smooth Muscle	Colon
14	chr3:23118000-23119200	Enhancers	Fetal Muscle Leg	muscle
15	chr3:23118000-23119200	Bivalent Enhancer	HSMM	muscle
16	chr3:23118000-23119400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr3:23118400-23119000	Bivalent Enhancer	NHEK	skin
18	chr3:23118400-23119200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr3:23118400-23119400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr3:23118400-23121000	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr3:23118400-23121200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr3:23118400-23121400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr3:23118400-23121400	Weak transcription	Adipose Nuclei	Adipose
24	chr3:23118600-23119400	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr3:23118600-23120800	Weak transcription	Fetal Heart	heart
26	chr3:23118600-23121400	Weak transcription	Fetal Lung	lung
27	chr3:23118600-23123000	Weak transcription	Aorta	Aorta
28	chr3:23118800-23119200	Enhancers	Monocytes-CD14+_RO01746	blood

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