The 2.0 version of rSNPBase

Variant report

Variant rs1487536
Chromosome Location chr1:92817556-92817557
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92771800-92823800 Weak transcription Colonic Mucosa Colon
3 chr1:92789800-92830600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:92792400-92823600 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:92792600-92846600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:92792800-92850800 Weak transcription Fetal Heart heart
7 chr1:92793600-92823400 Weak transcription Brain Cingulate Gyrus brain
8 chr1:92793800-92830200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:92794000-92823000 Weak transcription Brain Substantia Nigra brain
10 chr1:92795000-92817600 Weak transcription Brain Germinal Matrix brain
11 chr1:92795000-92823000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr1:92795200-92823400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:92795200-92825000 Weak transcription Aorta Aorta
14 chr1:92795200-92825000 Weak transcription Lung lung
15 chr1:92795200-92830400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:92795200-92846600 Weak transcription Gastric stomach
17 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:92795200-92851400 Weak transcription Spleen Spleen
19 chr1:92795400-92825200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:92795600-92825200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:92795600-92826400 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr1:92795600-92831200 Weak transcription NHLF lung
23 chr1:92795800-92817600 Weak transcription Brain Angular Gyrus brain
24 chr1:92795800-92817800 Weak transcription HSMMtube muscle
25 chr1:92795800-92834800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:92796400-92819600 Weak transcription Pancreas Pancrea
27 chr1:92796400-92823200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:92797800-92830800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:92798200-92846800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:92799600-92830400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr1:92800200-92818400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:92802800-92822800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:92804200-92825800 Weak transcription HUVEC blood vessel
34 chr1:92804400-92818400 Weak transcription K562 blood
35 chr1:92804400-92846400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:92804400-92853200 Weak transcription NHEK skin
37 chr1:92804600-92818400 Weak transcription Brain Anterior Caudate brain
38 chr1:92804600-92830200 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:92804600-92833200 Weak transcription NH-A brain
40 chr1:92805600-92827000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:92807000-92823400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:92808200-92824600 Weak transcription HMEC breast
43 chr1:92809000-92832800 Weak transcription Thymus Thymus
44 chr1:92811000-92817800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:92811200-92819800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:92811200-92820000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:92811200-92821600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:92811400-92817600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:92811400-92820200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:92811600-92818000 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015