Variant report

Variant	rs148766498
Chromosome Location	chr11:46972321-46972322
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:46970587..46973185-chr11:47182326..47184987,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1805201	chr11:46971012-47063429	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1819852	chr11:46971012-47064542	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46958600-46973800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr11:46959000-46973400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr11:46959000-46973600	Weak transcription	HUVEC	blood vessel
4	chr11:46959000-46973800	Weak transcription	Primary T cells from cord blood	blood
5	chr11:46959000-46973800	Weak transcription	Primary hematopoietic stem cells	blood
6	chr11:46959000-46973800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr11:46959000-46975600	Weak transcription	Fetal Muscle Trunk	muscle
8	chr11:46959000-46977000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr11:46959000-46980000	Weak transcription	Aorta	Aorta
10	chr11:46959000-46980000	Weak transcription	Fetal Muscle Leg	muscle
11	chr11:46959000-46980000	Weak transcription	Ovary	ovary
12	chr11:46959000-46980200	Weak transcription	Primary B cells from cord blood	blood
13	chr11:46959000-46980200	Weak transcription	Gastric	stomach
14	chr11:46959000-46980200	Weak transcription	Lung	lung
15	chr11:46959000-46980200	Weak transcription	Thymus	Thymus
16	chr11:46959000-46981000	Weak transcription	Primary T cells fromperipheralblood	blood
17	chr11:46959000-46982200	Weak transcription	Fetal Kidney	kidney
18	chr11:46959000-46982400	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr11:46959000-46982600	Weak transcription	Fetal Thymus	thymus
20	chr11:46959000-46998600	Weak transcription	Left Ventricle	heart
21	chr11:46959200-46973400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr11:46959200-46973600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr11:46959200-46973600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr11:46959200-46973600	Weak transcription	Brain Cingulate Gyrus	brain
25	chr11:46959200-46973800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr11:46959200-46980200	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr11:46959200-46980200	Weak transcription	Dnd41	blood
28	chr11:46959200-46985000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr11:46959200-46990600	Weak transcription	Brain Angular Gyrus	brain
30	chr11:46959200-46990600	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr11:46959200-46993800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr11:46959600-46978800	Weak transcription	Fetal Brain Male	brain
33	chr11:46959600-46980000	Weak transcription	Fetal Brain Female	brain
34	chr11:46964000-46973400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr11:46965200-46975200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr11:46965200-46975400	Weak transcription	Stomach Smooth Muscle	stomach
37	chr11:46965200-46984600	Weak transcription	Primary T helper cells PMA-I stimulated	--
38	chr11:46967200-46978800	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr11:46969000-46980200	Weak transcription	Fetal Lung	lung
40	chr11:46969200-46973600	Weak transcription	Brain Hippocampus Middle	brain
41	chr11:46969400-46972800	Weak transcription	HUES48 Cell Line	embryonic stem cell
42	chr11:46969400-46980000	Weak transcription	HUES6 Cell Line	embryonic stem cell
43	chr11:46969400-46980200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr11:46969600-46973600	Weak transcription	Brain Substantia Nigra	brain
45	chr11:46969800-46980000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr11:46970000-46973400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr11:46970000-46973400	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr11:46970000-46977000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr11:46970200-46973400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr11:46970200-46980000	Weak transcription	Fetal Stomach	stomach

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