Variant report

Variant	rs149302514
Chromosome Location	chr14:31459215-31459216
allele	-/AATGGGACAGAACAAGAGG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:31457071..31460059-chr14:31491796..31493863,2	MCF-7	breast:
2	chr14:31458647..31460710-chr14:31463564..31465601,2	K562	blood:
3	chr14:31458519..31461343-chr14:31465487..31467458,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564169	chr14:30819087-31541494	Strong transcription Genic enhancers ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv901581	chr14:30978745-31585289	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv901586	chr14:31365884-31465241	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3411274	chr14:31442250-31460681	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
5	nsv1035937	chr14:31447842-31579660	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
6	nsv542018	chr14:31447842-31579660	Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	nsv1048736	chr14:31447842-31624912	Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
8	esv3530562	chr14:31458824-31459787	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3530563	chr14:31458945-31459672	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31420200-31464400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr14:31440400-31462000	Weak transcription	Right Atrium	heart
3	chr14:31441000-31464800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr14:31441600-31464200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr14:31442400-31461400	Weak transcription	Left Ventricle	heart
6	chr14:31442400-31494400	Weak transcription	Gastric	stomach
7	chr14:31443000-31459800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr14:31443200-31460200	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr14:31443400-31460000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr14:31443400-31493800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr14:31443600-31462200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr14:31444000-31472800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
13	chr14:31444200-31459800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr14:31444200-31464000	Weak transcription	Brain Anterior Caudate	brain
15	chr14:31444400-31460600	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr14:31445000-31460600	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr14:31445800-31459600	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr14:31446600-31459800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr14:31446600-31461600	Weak transcription	Fetal Muscle Leg	muscle
20	chr14:31449400-31460800	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr14:31451200-31464200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr14:31452000-31460400	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr14:31452200-31460600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr14:31452600-31459800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr14:31453800-31460000	Weak transcription	Primary B cells from peripheral blood	blood
26	chr14:31453800-31460600	Weak transcription	Primary B cells from cord blood	blood
27	chr14:31454800-31462800	Weak transcription	Fetal Intestine Small	intestine
28	chr14:31455200-31459800	Weak transcription	GM12878-XiMat	blood
29	chr14:31455200-31466400	Weak transcription	Primary T cells from cord blood	blood
30	chr14:31455600-31460800	Weak transcription	Small Intestine	intestine
31	chr14:31455800-31460000	Weak transcription	Fetal Kidney	kidney
32	chr14:31455800-31460000	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr14:31456000-31459800	Weak transcription	Colon Smooth Muscle	Colon
34	chr14:31456000-31464400	Weak transcription	HUES64 Cell Line	embryonic stem cell
35	chr14:31456000-31465200	Weak transcription	Brain Angular Gyrus	brain
36	chr14:31456200-31459800	Weak transcription	Pancreatic Islets	Pancreatic Islet
37	chr14:31457000-31461000	Genic enhancers	HepG2	liver
38	chr14:31457000-31461200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr14:31457200-31460200	Weak transcription	Adipose Nuclei	Adipose
40	chr14:31457200-31460600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr14:31457200-31465000	Weak transcription	Pancreas	Pancrea
42	chr14:31457200-31467600	Weak transcription	Fetal Muscle Trunk	muscle
43	chr14:31457400-31467200	Weak transcription	Dnd41	blood
44	chr14:31457600-31460000	Weak transcription	Rectal Smooth Muscle	rectum
45	chr14:31457600-31464200	Weak transcription	Fetal Lung	lung
46	chr14:31457600-31467200	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr14:31458000-31460600	Weak transcription	Duodenum Mucosa	Duodenum
48	chr14:31458200-31459600	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr14:31458200-31463800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr14:31458200-31463800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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