Variant report

Variant rs1493998
Chromosome Location chr9:591094-591095
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:581400-591400 Weak transcription Fetal Intestine Large intestine
3 chr9:582000-591400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:582600-591400 Weak transcription Gastric stomach
5 chr9:583000-594400 Weak transcription Fetal Kidney kidney
6 chr9:588800-591400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr9:589000-591600 Enhancers Brain Cingulate Gyrus brain
8 chr9:589000-592000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr9:589200-591800 Enhancers Cortex derived primary cultured neurospheres brain
10 chr9:589200-592600 Enhancers Brain Anterior Caudate brain
11 chr9:589400-592800 Enhancers HMEC breast
12 chr9:589400-593400 Enhancers A549 lung
13 chr9:589800-593000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr9:590000-591200 Weak transcription Ovary ovary
15 chr9:590000-591400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr9:590000-591400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr9:590000-591400 Weak transcription Left Ventricle heart
18 chr9:590000-592000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr9:590000-625000 Weak transcription Aorta Aorta
20 chr9:590200-591200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr9:590200-591200 Weak transcription Fetal Muscle Leg muscle
22 chr9:590200-591400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr9:590200-591400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr9:590200-591400 Weak transcription Brain Hippocampus Middle brain
25 chr9:590200-591400 Weak transcription Esophagus oesophagus
26 chr9:590200-591400 Weak transcription Pancreas Pancrea
27 chr9:590200-591400 Weak transcription Placenta Amnion Placenta Amnion
28 chr9:590200-591400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr9:590200-591400 Weak transcription Stomach Mucosa stomach
30 chr9:590200-591800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr9:590200-591800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr9:590200-591800 Enhancers Fetal Heart heart
33 chr9:590200-592000 Weak transcription H1 Cell Line embryonic stem cell
34 chr9:590200-592000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr9:590200-592000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr9:590200-592000 Weak transcription Right Ventricle heart
37 chr9:590200-593000 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr9:590200-600200 Weak transcription Placenta Placenta
39 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
40 chr9:590400-591400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr9:590400-591400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr9:590400-591400 Weak transcription Brain Angular Gyrus brain
43 chr9:590400-591400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr9:590400-591400 Weak transcription Brain Substantia Nigra brain
45 chr9:590400-591400 Weak transcription Fetal Lung lung
46 chr9:590400-591400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr9:590400-591400 Weak transcription Rectal Smooth Muscle rectum
48 chr9:590400-591400 Weak transcription Right Atrium heart
49 chr9:590400-591400 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr9:590400-591400 Weak transcription Skeletal Muscle Female skeletal muscle

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