Variant report

Variant	rs149633901
Chromosome Location	chr4:148115630-148115631
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases
2	nsv830108	chr4:148114652-148311104	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148105600-148115800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:148111800-148117800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr4:148115200-148115800	Enhancers	Fetal Heart	heart
4	chr4:148115200-148116200	Enhancers	Left Ventricle	heart
5	chr4:148115200-148117000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr4:148115200-148117000	Enhancers	HSMM	muscle
7	chr4:148115400-148116000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr4:148115400-148116200	Enhancers	Small Intestine	intestine
9	chr4:148115400-148116600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:148115400-148116600	Enhancers	HSMMtube	muscle
11	chr4:148115400-148116800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr4:148115400-148116800	Enhancers	NHDF-Ad	bronchial
13	chr4:148115400-148117000	Enhancers	NH-A	brain
14	chr4:148115600-148115800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr4:148115600-148116000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr4:148115600-148116000	Active TSS	Brain Inferior Temporal Lobe	brain
17	chr4:148115600-148116000	Weak transcription	Fetal Stomach	stomach
18	chr4:148115600-148116000	Active TSS	Ovary	ovary
19	chr4:148115600-148116400	Flanking Active TSS	Osteobl	bone

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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