Variant report
| Variant | rs1496590 |
|---|---|
| Chromosome Location | chr4:79480418-79480419 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:79473400-79481400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr4:79473400-79481400 | Weak transcription | HSMM | muscle |
| 3 | chr4:79473400-79481600 | Weak transcription | Gastric | stomach |
| 4 | chr4:79473400-79481600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr4:79473400-79485400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 6 | chr4:79473600-79481400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 7 | chr4:79473600-79481600 | Weak transcription | Pancreas | Pancrea |
| 8 | chr4:79473600-79481800 | Weak transcription | Small Intestine | intestine |
| 9 | chr4:79473600-79487200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr4:79473800-79481400 | Weak transcription | Aorta | Aorta |
| 11 | chr4:79474000-79482200 | Weak transcription | Colon Smooth Muscle | Colon |
| 12 | chr4:79474400-79481400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 13 | chr4:79474400-79481400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 14 | chr4:79474400-79481800 | Weak transcription | Esophagus | oesophagus |
| 15 | chr4:79474400-79486600 | Weak transcription | Psoas Muscle | Psoas |
| 16 | chr4:79474400-79527200 | Weak transcription | Spleen | Spleen |
| 17 | chr4:79474600-79480800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 18 | chr4:79474600-79481400 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr4:79474600-79481800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr4:79474600-79482400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 21 | chr4:79474600-79488200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr4:79474800-79481600 | Weak transcription | K562 | blood |
| 23 | chr4:79475000-79480800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 24 | chr4:79475000-79481400 | Weak transcription | Fetal Heart | heart |
| 25 | chr4:79475000-79481600 | Weak transcription | Placenta | Placenta |
| 26 | chr4:79475200-79481600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 27 | chr4:79475200-79481600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 28 | chr4:79475200-79481600 | Weak transcription | Lung | lung |
| 29 | chr4:79475400-79480800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 30 | chr4:79475400-79481200 | Weak transcription | NH-A | brain |
| 31 | chr4:79475400-79481600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 32 | chr4:79475600-79481400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr4:79475600-79481400 | Weak transcription | HSMMtube | muscle |
| 34 | chr4:79475600-79482200 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr4:79475600-79483800 | Genic enhancers | HMEC | breast |
| 36 | chr4:79476800-79486600 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 37 | chr4:79477200-79483000 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 38 | chr4:79478200-79481000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 39 | chr4:79478400-79483600 | Enhancers | HUVEC | blood vessel |
| 40 | chr4:79478600-79480800 | Enhancers | Hela-S3 | cervix |
| 41 | chr4:79478800-79481400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 42 | chr4:79478800-79481400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 43 | chr4:79478800-79482600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr4:79478800-79484200 | Genic enhancers | NHEK | skin |
| 45 | chr4:79478800-79484800 | Genic enhancers | Primary neutrophils fromperipheralblood | blood |
| 46 | chr4:79478800-79489800 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 47 | chr4:79479400-79481400 | Weak transcription | Osteobl | bone |
| 48 | chr4:79479600-79481800 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 49 | chr4:79479800-79481000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 50 | chr4:79479800-79481400 | Weak transcription | Stomach Mucosa | stomach |
