The 2.0 version of rSNPBase

Variant report

Variant rs1497143
Chromosome Location chr4:143114011-143114012
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143049800-143114400 Weak transcription Right Ventricle heart
2 chr4:143057800-143114400 Weak transcription Aorta Aorta
3 chr4:143058000-143181000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr4:143070400-143134400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr4:143071000-143117800 Weak transcription Psoas Muscle Psoas
6 chr4:143072000-143137000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr4:143081000-143128200 Weak transcription NHDF-Ad bronchial
8 chr4:143082000-143130000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr4:143082400-143134800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:143082800-143115800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr4:143089400-143118000 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr4:143090000-143117400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr4:143092400-143116200 Weak transcription Stomach Smooth Muscle stomach
14 chr4:143092400-143131000 Weak transcription Fetal Intestine Large intestine
15 chr4:143095000-143115400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr4:143095000-143128000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr4:143095000-143128200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr4:143095000-143154200 Weak transcription Left Ventricle heart
19 chr4:143097800-143114600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:143098600-143116600 Weak transcription Fetal Intestine Small intestine
21 chr4:143102400-143125600 Weak transcription Fetal Muscle Leg muscle
22 chr4:143102400-143128000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr4:143103800-143116000 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr4:143104800-143115600 Weak transcription Duodenum Mucosa Duodenum
25 chr4:143109800-143118000 Strong transcription Primary T cells fromperipheralblood blood
26 chr4:143110200-143115000 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr4:143110200-143118000 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr4:143110200-143119200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:143110400-143114400 Strong transcription Dnd41 blood
30 chr4:143111400-143115000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
31 chr4:143112000-143114400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:143112000-143114600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr4:143112000-143116200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr4:143112200-143114400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr4:143112200-143114400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr4:143112200-143114600 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr4:143112200-143114600 Strong transcription HSMMtube muscle
38 chr4:143112400-143114200 Genic enhancers Muscle Satellite Cultured Cells --
39 chr4:143112400-143114400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr4:143112400-143114600 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr4:143112400-143115200 Strong transcription HSMM muscle
42 chr4:143112600-143114200 Enhancers Osteobl bone
43 chr4:143112600-143137600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr4:143113200-143117800 Strong transcription HMEC breast
45 chr4:143113400-143117600 Weak transcription Small Intestine intestine
46 chr4:143113600-143114600 Strong transcription Primary T cells from cord blood blood
47 chr4:143113600-143114800 Strong transcription NHEK skin
48 chr4:143113600-143115400 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr4:143113800-143114400 Enhancers Brain Germinal Matrix brain
50 chr4:143113800-143114600 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015