The 2.0 version of rSNPBase

Variant report

Variant rs1498810
Chromosome Location chr3:23538267-23538268
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23523600-23542400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:23526600-23554000 Weak transcription Primary T cells from cord blood blood
3 chr3:23528000-23542200 Weak transcription Right Ventricle heart
4 chr3:23528600-23542200 Weak transcription Primary B cells from cord blood blood
5 chr3:23528600-23552200 Weak transcription Ovary ovary
6 chr3:23530600-23542200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr3:23531400-23541600 Weak transcription Fetal Muscle Leg muscle
8 chr3:23532200-23547800 Weak transcription NHLF lung
9 chr3:23536600-23557200 Weak transcription Left Ventricle heart
10 chr3:23537400-23538600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:23537400-23541400 Weak transcription Psoas Muscle Psoas
12 chr3:23537400-23542200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr3:23537400-23542400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:23537400-23542400 Weak transcription HMEC breast
15 chr3:23537400-23542600 Weak transcription Brain Hippocampus Middle brain
16 chr3:23537400-23542600 Weak transcription HSMM muscle
17 chr3:23537400-23542800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr3:23537400-23543000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:23537400-23551400 Weak transcription Adipose Nuclei Adipose
20 chr3:23537400-23559400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr3:23537600-23538600 Weak transcription HSMMtube muscle
22 chr3:23537600-23539000 Enhancers GM12878-XiMat blood
23 chr3:23537600-23542600 Weak transcription NHEK skin
24 chr3:23537600-23542800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr3:23537600-23542800 Weak transcription Muscle Satellite Cultured Cells --
26 chr3:23537600-23542800 Weak transcription Osteobl bone
27 chr3:23537800-23542200 Weak transcription Brain Substantia Nigra brain
28 chr3:23537800-23542600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr3:23537800-23542800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr3:23538200-23538600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015