Variant report

Variant	rs1506074
Chromosome Location	chr1:225232264-225232265
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:225229374..225230956-chr1:225231061..225233757,2	K562	blood:

Extended variants
information (count: 226 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:216)

rs_ID	r²[population]
rs10495228	0.81[JPT][hapmap]
rs10495229	0.80[JPT][hapmap]
rs1080260	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10915779	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10915782	0.83[ASN][1000 genomes]
rs10915783	0.83[ASN][1000 genomes]
rs10915784	0.82[ASN][1000 genomes]
rs10915787	0.83[ASN][1000 genomes]
rs1110378	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1110379	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11588063	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12067806	0.94[CHB][hapmap];0.87[JPT][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12080027	0.83[ASN][1000 genomes]
rs12561993	0.81[JPT][hapmap]
rs12562045	0.86[ASN][1000 genomes]
rs12562085	0.81[JPT][hapmap]
rs12563434	0.83[ASN][1000 genomes]
rs12563857	0.81[JPT][hapmap]
rs12565439	0.86[JPT][hapmap]
rs12565929	0.83[ASN][1000 genomes]
rs12566857	0.81[JPT][hapmap]
rs12567091	0.81[JPT][hapmap]
rs12733009	0.81[EUR][1000 genomes]
rs1395116	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1482279	0.81[JPT][hapmap]
rs1482280	0.85[JPT][hapmap]
rs1506069	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1506070	0.81[JPT][hapmap]
rs1506071	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1506072	1.00[CEU][hapmap];0.81[GIH][hapmap];0.93[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1506073	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1600531	0.83[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs16843950	0.81[JPT][hapmap]
rs16843988	0.81[JPT][hapmap]
rs16844355	0.81[JPT][hapmap]
rs16844377	0.81[JPT][hapmap]
rs16858661	0.81[JPT][hapmap]
rs16858758	0.81[JPT][hapmap]
rs16858829	0.81[JPT][hapmap]
rs16858962	0.87[JPT][hapmap]
rs1832540	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1842331	0.83[ASN][1000 genomes]
rs1847908	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1847909	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1936631	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1961688	0.86[JPT][hapmap]
rs1982707	0.81[JPT][hapmap]
rs2014656	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2014667	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2086368	0.81[JPT][hapmap]
rs2128268	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2128269	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2128270	1.00[CEU][hapmap];0.81[GIH][hapmap];0.93[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs2170109	0.83[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs2254158	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2254406	0.83[ASN][1000 genomes]
rs2405702	0.82[ASN][1000 genomes]
rs2406097	1.00[CEU][hapmap];0.81[JPT][hapmap];0.89[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2449256	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2449258	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2449259	0.81[JPT][hapmap]
rs2449269	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2449273	0.81[JPT][hapmap]
rs2449274	0.81[JPT][hapmap]
rs2449276	0.81[JPT][hapmap]
rs2449279	0.83[AFR][1000 genomes]
rs2449281	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2449287	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2449292	0.81[JPT][hapmap]
rs2449303	0.88[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs2449304	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2449307	0.88[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs2449308	0.88[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs2449311	0.81[JPT][hapmap]
rs2449313	0.87[JPT][hapmap]
rs2449315	1.00[CEU][hapmap];0.93[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2449320	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2449322	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2456328	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2456335	0.81[JPT][hapmap]
rs2456336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2456339	0.81[JPT][hapmap]
rs2456340	0.80[JPT][hapmap]
rs2456341	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2456342	0.90[AFR][1000 genomes]
rs2456349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2456351	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2489298	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2489301	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2489303	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2489311	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2489313	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2489314	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2489322	0.81[JPT][hapmap]
rs2489324	1.00[CEU][hapmap];0.81[GIH][hapmap];0.93[JPT][hapmap];0.94[MEX][hapmap];0.93[TSI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2489327	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2489337	0.83[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2489343	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2489346	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2489348	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2489352	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2489353	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2489355	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2501064	0.81[JPT][hapmap]
rs2501066	0.81[JPT][hapmap]
rs2501072	0.81[JPT][hapmap]
rs2501078	1.00[CEU][hapmap];0.92[JPT][hapmap];0.80[AMR][1000 genomes]
rs2501082	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2501083	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2501085	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2501086	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2501087	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2501099	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2501100	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2501101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2501107	0.94[CHB][hapmap];0.87[JPT][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2501108	0.94[CHB][hapmap];0.93[JPT][hapmap];0.88[YRI][hapmap];0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2501110	1.00[CEU][hapmap];0.94[CHB][hapmap];0.87[JPT][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2501114	0.81[JPT][hapmap]
rs2501120	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2501129	0.81[JPT][hapmap]
rs2501130	0.81[JPT][hapmap]
rs2501133	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2501141	0.81[JPT][hapmap]
rs2501147	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2501151	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2501156	0.81[JPT][hapmap]
rs2929626	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2929628	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2939363	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3101904	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3101906	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3101908	0.81[JPT][hapmap]
rs3101909	0.86[ASN][1000 genomes]
rs3101910	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3101913	0.80[AMR][1000 genomes]
rs3101914	0.82[ASN][1000 genomes]
rs3101916	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3101917	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3102106	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3102108	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3102109	0.87[AFR][1000 genomes]
rs3102110	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3102112	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3102113	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3102115	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3102116	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105551	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105552	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105553	0.88[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs3105554	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105556	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105558	0.94[CHB][hapmap];0.87[JPT][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105559	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105560	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3105561	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3105562	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105563	0.85[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs3105564	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3105565	0.94[CHB][hapmap];0.93[JPT][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105566	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105567	0.84[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105568	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3105569	0.83[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs3105572	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3120987	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3120989	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3120990	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3120991	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3120993	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3128643	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128644	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128646	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128649	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128650	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128651	0.85[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs3128652	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3128653	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128654	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128655	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128656	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128657	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128658	0.94[CHB][hapmap];0.97[CHD][hapmap];0.87[JPT][hapmap];0.90[LWK][hapmap];0.92[MKK][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128659	0.86[JPT][hapmap]
rs3128660	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3128662	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3128664	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128666	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128667	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3128675	0.83[ASN][1000 genomes]
rs3128676	0.83[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs55764147	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56088855	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs56339924	0.86[EUR][1000 genomes]
rs61041116	0.83[ASN][1000 genomes]
rs61211002	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61438284	0.86[EUR][1000 genomes]
rs61849768	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6426051	0.88[EUR][1000 genomes]
rs6426163	0.81[JPT][hapmap]
rs6674717	0.82[ASN][1000 genomes]
rs6683938	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6686694	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6689915	0.88[EUR][1000 genomes]
rs6697156	0.81[JPT][hapmap]
rs6697382	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6702733	0.88[EUR][1000 genomes]
rs7521702	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7523949	0.87[JPT][hapmap]
rs7530659	0.92[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs7531542	0.81[JPT][hapmap]
rs7548138	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs769296	0.81[ASN][1000 genomes]
rs981067	0.94[CHB][hapmap];0.87[JPT][hapmap];0.93[MKK][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs9919209	0.83[AMR][1000 genomes]
rs995613	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757773	chr1:225087924-225253274	Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	esv2759001	chr1:225087924-225253274	Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	esv3438976	chr1:225133567-225248753	Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv873225	chr1:225162060-225373936	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv549262	chr1:225191852-225319898	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv549263	chr1:225202426-225319898	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv998899	chr1:225210813-225496353	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv1004856	chr1:225228287-225271137	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv526708	chr1:225229866-225273248	ZNF genes & repeats Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv1808493	chr1:225232264-225267066	Weak transcription ZNF genes & repeats Enhancers Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs1506074	TMEM63A	cis	cerebellum	SCAN
rs1506074	CAPN2	cis	cerebellum	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225205600-225235600	Weak transcription	Pancreas	Pancrea
2	chr1:225215600-225242200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr1:225223400-225236000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr1:225227000-225238400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:225227000-225240200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr1:225231600-225232600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr1:225232000-225232800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr1:225232200-225232600	Enhancers	Fetal Lung	lung

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