Variant report

Variant	rs151324581
Chromosome Location	chr11:35377206-35377207
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:35351151..35353961-chr11:35376008..35377580,2	MCF-7	breast:
2	chr11:35327322..35328895-chr11:35375252..35377771,2	MCF-7	breast:
3	chr11:35345181..35347879-chr11:35376874..35378996,2	MCF-7	breast:
4	chr11:35358486..35360321-chr11:35376414..35377943,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045837	chr11:34893992-35395190	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
2	nsv832120	chr11:35277410-35490304	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv2758264	chr11:35319320-35480522	Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	esv2759819	chr11:35319320-35480522	Weak transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv430372	chr11:35376124-35430324	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:35367000-35385400	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr11:35367200-35380200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr11:35368600-35379800	Weak transcription	Brain Anterior Caudate	brain
4	chr11:35370200-35380800	Weak transcription	Aorta	Aorta
5	chr11:35370200-35384200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr11:35371400-35377400	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr11:35372600-35377600	Enhancers	NHDF-Ad	bronchial
8	chr11:35373000-35380400	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr11:35374400-35379000	Weak transcription	NHLF	lung
10	chr11:35374400-35379200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr11:35374400-35381400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr11:35374400-35381600	Weak transcription	Pancreas	Pancrea
13	chr11:35374400-35384600	Weak transcription	Psoas Muscle	Psoas
14	chr11:35374400-35384600	Weak transcription	Right Ventricle	heart
15	chr11:35374600-35379000	Weak transcription	Liver	Liver
16	chr11:35374600-35379400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:35375000-35383600	Weak transcription	Left Ventricle	heart
18	chr11:35375200-35379000	Weak transcription	Hela-S3	cervix
19	chr11:35376400-35384400	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr11:35376600-35385000	Weak transcription	HSMM	muscle
21	chr11:35376800-35377600	Enhancers	HMEC	breast
22	chr11:35376800-35379200	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr11:35377000-35378600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr11:35377000-35381400	Weak transcription	Brain Angular Gyrus	brain
25	chr11:35377000-35383800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr11:35377000-35384600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr11:35377000-35384600	Weak transcription	Right Atrium	heart
28	chr11:35377200-35379000	Weak transcription	HepG2	liver
29	chr11:35377200-35379200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
30	chr11:35377200-35379200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr11:35377200-35379200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr11:35377200-35380400	Weak transcription	Brain Hippocampus Middle	brain
33	chr11:35377200-35380800	Weak transcription	Fetal Brain Male	brain
34	chr11:35377200-35381200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr11:35377200-35384400	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr11:35377200-35384800	Weak transcription	Osteobl	bone

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