The 2.0 version of rSNPBase

Variant report

Variant rs151573
Chromosome Location chr6:101086333-101086334
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:101025800-101099800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:101032400-101102000 Weak transcription Thymus Thymus
3 chr6:101032400-101104400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr6:101032600-101102000 Weak transcription Brain Hippocampus Middle brain
5 chr6:101032600-101110400 Weak transcription Colon Smooth Muscle Colon
6 chr6:101034400-101092400 Weak transcription Pancreas Pancrea
7 chr6:101037400-101110600 Weak transcription K562 blood
8 chr6:101037800-101107200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr6:101062600-101101600 Weak transcription Rectal Smooth Muscle rectum
10 chr6:101062800-101094200 Weak transcription Fetal Stomach stomach
11 chr6:101062800-101097000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr6:101063800-101102600 Weak transcription Small Intestine intestine
13 chr6:101065400-101092400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr6:101067600-101102200 Weak transcription Right Ventricle heart
15 chr6:101068400-101106200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr6:101068800-101093200 Weak transcription Esophagus oesophagus
17 chr6:101070200-101094200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:101070400-101092400 Weak transcription Fetal Intestine Small intestine
19 chr6:101070400-101092600 Weak transcription Lung lung
20 chr6:101070400-101094600 Weak transcription H9 Cell Line embryonic stem cell
21 chr6:101070400-101096200 Weak transcription Spleen Spleen
22 chr6:101070400-101100000 Weak transcription H1 Cell Line embryonic stem cell
23 chr6:101071600-101094400 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr6:101071600-101104600 Weak transcription Brain Angular Gyrus brain
25 chr6:101071600-101127800 Weak transcription Hela-S3 cervix
26 chr6:101071800-101099200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:101075400-101091000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr6:101075600-101100000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr6:101075800-101086400 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr6:101076200-101086400 Weak transcription Primary B cells from peripheral blood blood
31 chr6:101076400-101107200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr6:101076400-101110400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:101076600-101086600 Weak transcription Primary T cells fromperipheralblood blood
34 chr6:101076600-101090600 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr6:101076600-101092400 Weak transcription Brain Cingulate Gyrus brain
36 chr6:101076600-101094400 Weak transcription Aorta Aorta
37 chr6:101076800-101086400 Weak transcription Primary monocytes fromperipheralblood blood
38 chr6:101077200-101092400 Weak transcription HUVEC blood vessel
39 chr6:101081200-101106000 Weak transcription Fetal Brain Male brain
40 chr6:101081400-101099200 Weak transcription NHEK skin
41 chr6:101081400-101100000 Weak transcription HepG2 liver
42 chr6:101081600-101110800 Weak transcription HSMMtube muscle
43 chr6:101081800-101102600 Weak transcription A549 lung
44 chr6:101082000-101102400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr6:101082200-101087400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:101082200-101096000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:101082400-101096000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr6:101083200-101086800 Strong transcription Primary B cells from cord blood blood
49 chr6:101083200-101087000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:101083200-101095200 Strong transcription HSMM muscle

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Last update: Aug 31, 2015