Variant report
| Variant | rs1520225 |
|---|---|
| Chromosome Location | chr12:11025857-11025858 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:10994400-11035000 | Weak transcription | Fetal Kidney | kidney |
| 2 | chr12:10998600-11034800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 3 | chr12:10999000-11029200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 4 | chr12:11007000-11038800 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr12:11007200-11039400 | Weak transcription | Right Ventricle | heart |
| 6 | chr12:11008800-11029400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 7 | chr12:11008800-11030000 | Weak transcription | HSMMtube | muscle |
| 8 | chr12:11009200-11029200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 9 | chr12:11009200-11035200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr12:11009200-11045800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr12:11009600-11030000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 12 | chr12:11011600-11030000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr12:11011800-11029800 | Weak transcription | Liver | Liver |
| 14 | chr12:11011800-11030000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 15 | chr12:11011800-11030000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 16 | chr12:11011800-11031800 | Weak transcription | Thymus | Thymus |
| 17 | chr12:11012000-11034200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr12:11012200-11031200 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr12:11012200-11051800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 20 | chr12:11012200-11055800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 21 | chr12:11012200-11056200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 22 | chr12:11013200-11032800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 23 | chr12:11014400-11030000 | Weak transcription | Ovary | ovary |
| 24 | chr12:11014400-11030000 | Weak transcription | Pancreas | Pancrea |
| 25 | chr12:11014400-11043400 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr12:11014400-11052000 | Weak transcription | Fetal Brain Male | brain |
| 27 | chr12:11015200-11029200 | Weak transcription | Adipose Nuclei | Adipose |
| 28 | chr12:11015800-11029400 | Weak transcription | Dnd41 | blood |
| 29 | chr12:11016200-11030000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 30 | chr12:11016800-11030000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr12:11017000-11029400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr12:11019200-11029600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 33 | chr12:11019200-11030200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 34 | chr12:11019600-11029400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 35 | chr12:11019600-11030000 | Weak transcription | Brain Hippocampus Middle | brain |
| 36 | chr12:11019800-11030000 | Weak transcription | Primary B cells from cord blood | blood |
| 37 | chr12:11019800-11030000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr12:11019800-11030200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 39 | chr12:11020200-11035800 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr12:11020200-11045400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 41 | chr12:11021400-11028800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 42 | chr12:11021400-11029000 | Weak transcription | Primary T cells from cord blood | blood |
| 43 | chr12:11021400-11030000 | Weak transcription | Aorta | Aorta |
| 44 | chr12:11021400-11030000 | Weak transcription | Left Ventricle | heart |
| 45 | chr12:11021600-11028000 | Weak transcription | Fetal Muscle Leg | muscle |
| 46 | chr12:11021600-11029200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr12:11021600-11030200 | Weak transcription | HepG2 | liver |
| 48 | chr12:11024600-11031400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 49 | chr12:11024800-11037600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 50 | chr12:11025600-11030000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
