Variant report

Variant	rs1520625
Chromosome Location	chr3:34608876-34608877
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11920118	0.92[ASN][1000 genomes]
rs13081272	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17031936	0.87[ASN][1000 genomes]
rs28657868	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs36059582	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9311058	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34607200-34609200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:34608000-34611400	Enhancers	Fetal Heart	heart
3	chr3:34608600-34609000	Enhancers	Fetal Brain Female	brain
4	chr3:34608800-34609200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr3:34608800-34609200	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr3:34608800-34609400	Enhancers	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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