Variant report

Variant rs153031
Chromosome Location chr5:59787291-59787292
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59767200-59789000 Weak transcription Primary B cells from cord blood blood
2 chr5:59782000-59801000 Weak transcription Fetal Brain Male brain
3 chr5:59783000-59787600 Active TSS Brain Inferior Temporal Lobe brain
4 chr5:59784200-59787800 Enhancers Muscle Satellite Cultured Cells --
5 chr5:59784200-59790600 Weak transcription Brain Anterior Caudate brain
6 chr5:59784600-59788800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr5:59784600-59789000 Weak transcription NHDF-Ad bronchial
8 chr5:59784600-59791200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr5:59784600-59791800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr5:59784600-59794200 Weak transcription Gastric stomach
11 chr5:59784800-59788800 Weak transcription Stomach Mucosa stomach
12 chr5:59784800-59793600 Weak transcription Colon Smooth Muscle Colon
13 chr5:59785000-59788800 Weak transcription HSMM muscle
14 chr5:59785200-59787400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:59785200-59788800 Weak transcription Osteobl bone
16 chr5:59785200-59791800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr5:59785200-59793400 Weak transcription Fetal Stomach stomach
18 chr5:59785600-59789000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr5:59785600-59789000 Weak transcription HMEC breast
20 chr5:59785800-59787400 Enhancers A549 lung
21 chr5:59785800-59791000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:59786000-59790800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:59786400-59789800 Weak transcription Brain Cingulate Gyrus brain
24 chr5:59786600-59787800 Enhancers HepG2 liver
25 chr5:59786600-59788800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr5:59786600-59788800 Weak transcription Aorta Aorta
27 chr5:59786600-59790000 Weak transcription Brain Hippocampus Middle brain
28 chr5:59787000-59788800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr5:59787000-59788800 Weak transcription NHEK skin
30 chr5:59787200-59789400 Weak transcription Stomach Smooth Muscle stomach
31 chr5:59787200-59789800 Weak transcription Brain Angular Gyrus brain
32 chr5:59787200-59790200 Weak transcription Brain Substantia Nigra brain
33 chr5:59787200-59793400 Weak transcription Rectal Smooth Muscle rectum

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