Variant report

Variant rs154449
Chromosome Location chr5:95199332-95199333
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95179000-95206000 Weak transcription Spleen Spleen
2 chr5:95192000-95201400 Enhancers Placenta Placenta
3 chr5:95192200-95199400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:95194000-95200800 Weak transcription Gastric stomach
5 chr5:95194200-95203000 Enhancers Pancreatic Islets Pancreatic Islet
6 chr5:95194800-95199400 Enhancers Liver Liver
7 chr5:95195000-95200200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr5:95195000-95200600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr5:95195000-95206400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr5:95195000-95208400 Weak transcription Ovary ovary
11 chr5:95195200-95200600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr5:95195200-95217400 Weak transcription Brain Cingulate Gyrus brain
13 chr5:95195400-95201600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:95195600-95206200 Weak transcription Brain Anterior Caudate brain
15 chr5:95195800-95199600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
16 chr5:95195800-95201000 Weak transcription Brain Substantia Nigra brain
17 chr5:95195800-95201200 Enhancers Primary monocytes fromperipheralblood blood
18 chr5:95195800-95201200 Enhancers NHLF lung
19 chr5:95196600-95199600 Enhancers Primary B cells from cord blood blood
20 chr5:95196800-95199400 Enhancers Primary T cells from cord blood blood
21 chr5:95196800-95199400 Enhancers Fetal Thymus thymus
22 chr5:95196800-95199400 Enhancers Pancreas Pancrea
23 chr5:95196800-95199400 Enhancers Psoas Muscle Psoas
24 chr5:95196800-95199400 Enhancers Right Ventricle heart
25 chr5:95196800-95199400 Flanking Active TSS Hela-S3 cervix
26 chr5:95196800-95202000 Enhancers Fetal Intestine Small intestine
27 chr5:95196800-95203000 Enhancers Fetal Intestine Large intestine
28 chr5:95197000-95199400 Enhancers Lung lung
29 chr5:95197000-95199400 Enhancers Dnd41 blood
30 chr5:95197000-95200000 Enhancers Small Intestine intestine
31 chr5:95197000-95201200 Enhancers Left Ventricle heart
32 chr5:95197000-95201800 Enhancers Stomach Mucosa stomach
33 chr5:95197200-95201200 Enhancers NHDF-Ad bronchial
34 chr5:95197200-95203200 Enhancers Muscle Satellite Cultured Cells --
35 chr5:95197400-95199400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr5:95197400-95199600 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
37 chr5:95197400-95200000 Enhancers Skeletal Muscle Female skeletal muscle
38 chr5:95197400-95200600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr5:95197400-95201200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:95197600-95199400 Enhancers A549 lung
41 chr5:95197600-95199400 Enhancers GM12878-XiMat blood
42 chr5:95197600-95199600 Enhancers Duodenum Mucosa Duodenum
43 chr5:95197600-95200000 Enhancers HSMM muscle
44 chr5:95197800-95199400 Enhancers HSMMtube muscle
45 chr5:95197800-95200400 Enhancers Adipose Nuclei Adipose
46 chr5:95197800-95201200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:95197800-95204800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr5:95198200-95199400 Enhancers HUVEC blood vessel
49 chr5:95198200-95202600 Weak transcription HMEC breast
50 chr5:95198400-95200000 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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