Variant report

Variant rs1552690
Chromosome Location chr4:187611020-187611021
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187583000-187614400 Weak transcription Colonic Mucosa Colon
2 chr4:187591200-187614400 Weak transcription Ovary ovary
3 chr4:187598200-187614400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr4:187600200-187617000 Weak transcription Fetal Muscle Trunk muscle
5 chr4:187604400-187611600 Enhancers Fetal Lung lung
6 chr4:187604600-187618000 Weak transcription Fetal Stomach stomach
7 chr4:187604600-187626800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:187605800-187611200 Enhancers Rectal Smooth Muscle rectum
9 chr4:187605800-187614400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr4:187606000-187611800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr4:187606000-187612000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr4:187606200-187614000 Weak transcription Right Ventricle heart
13 chr4:187606400-187614400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:187606400-187614400 Weak transcription Brain Anterior Caudate brain
15 chr4:187606800-187611200 Enhancers Fetal Heart heart
16 chr4:187607000-187611600 Enhancers Colon Smooth Muscle Colon
17 chr4:187607000-187614400 Weak transcription Duodenum Mucosa Duodenum
18 chr4:187607000-187614400 Weak transcription Stomach Smooth Muscle stomach
19 chr4:187607400-187614000 Weak transcription Fetal Muscle Leg muscle
20 chr4:187607400-187614200 Weak transcription Hela-S3 cervix
21 chr4:187607400-187618200 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr4:187608000-187611600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr4:187608000-187614400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr4:187608000-187619400 Weak transcription Small Intestine intestine
25 chr4:187608000-187632400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr4:187608200-187612600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr4:187608200-187622200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr4:187608400-187614000 Weak transcription Adipose Nuclei Adipose
29 chr4:187608400-187614400 Weak transcription HSMMtube muscle
30 chr4:187608600-187611200 Genic enhancers NHEK skin
31 chr4:187608600-187614000 Weak transcription Muscle Satellite Cultured Cells --
32 chr4:187608600-187614400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr4:187608800-187611400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:187609200-187611200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr4:187609200-187612400 Weak transcription Osteobl bone
36 chr4:187609200-187614600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr4:187609400-187611200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr4:187609400-187611600 Enhancers HUES64 Cell Line embryonic stem cell
39 chr4:187609400-187611600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr4:187609600-187612000 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr4:187609800-187611800 Enhancers H1 Cell Line embryonic stem cell
42 chr4:187609800-187614400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr4:187609800-187614400 Weak transcription H9 Cell Line embryonic stem cell
44 chr4:187609800-187614400 Weak transcription Aorta Aorta
45 chr4:187609800-187614400 Weak transcription Lung lung
46 chr4:187609800-187614400 Weak transcription Right Atrium heart
47 chr4:187610000-187611800 Enhancers HUES6 Cell Line embryonic stem cell
48 chr4:187610000-187613800 Weak transcription Pancreas Pancrea
49 chr4:187610000-187614000 Weak transcription Left Ventricle heart
50 chr4:187610000-187614400 Weak transcription Gastric stomach

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