The 2.0 version of rSNPBase

Variant report

Variant rs1561010
Chromosome Location chr2:11783374-11783375
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11724400-11788600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11733600-11784000 Strong transcription HepG2 liver
3 chr2:11752000-11784400 Strong transcription Ovary ovary
4 chr2:11767600-11784600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr2:11767600-11786000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr2:11767600-11788600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:11767800-11785000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr2:11767800-11787000 Weak transcription Fetal Kidney kidney
9 chr2:11770400-11786400 Weak transcription Fetal Lung lung
10 chr2:11772000-11783600 Strong transcription Fetal Stomach stomach
11 chr2:11773400-11790600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr2:11775800-11785600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr2:11777200-11783800 Strong transcription Fetal Muscle Trunk muscle
14 chr2:11777800-11784800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:11778800-11784600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr2:11779200-11788200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:11779400-11783800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:11779800-11783400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr2:11780000-11784600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:11780000-11784600 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr2:11780200-11791400 Weak transcription Brain Substantia Nigra brain
22 chr2:11780400-11789000 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr2:11780600-11807200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr2:11780800-11785000 Weak transcription Left Ventricle heart
25 chr2:11780800-11788600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:11780800-11788800 Weak transcription Gastric stomach
27 chr2:11780800-11792000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:11781000-11783400 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr2:11781000-11784800 Weak transcription H9 Cell Line embryonic stem cell
30 chr2:11781000-11785200 Weak transcription Liver Liver
31 chr2:11781000-11785800 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:11781200-11790600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr2:11781400-11784600 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr2:11781600-11784000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:11781600-11785400 Weak transcription Brain Angular Gyrus brain
36 chr2:11782800-11783600 Strong transcription Brain Hippocampus Middle brain
37 chr2:11782800-11784200 Strong transcription Fetal Muscle Leg muscle
38 chr2:11783000-11783400 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:11783000-11783600 Strong transcription HUES64 Cell Line embryonic stem cell
40 chr2:11783000-11784000 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr2:11783000-11784200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr2:11783200-11783600 Strong transcription Brain Anterior Caudate brain
43 chr2:11783200-11783800 Strong transcription Brain Inferior Temporal Lobe brain
44 chr2:11783200-11783800 Strong transcription Pancreas Pancrea
45 chr2:11783200-11784200 Strong transcription Brain Cingulate Gyrus brain
46 chr2:11783200-11784400 Strong transcription H1 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015