The 2.0 version of rSNPBase

Variant report

Variant rs1568258
Chromosome Location chr2:181931548-181931549
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181902800-181934200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr2:181903800-181934600 Weak transcription NH-A brain
3 chr2:181904400-181934000 Weak transcription NHDF-Ad bronchial
4 chr2:181904400-181945400 Weak transcription Left Ventricle heart
5 chr2:181911800-181940400 Weak transcription Primary T cells from cord blood blood
6 chr2:181912400-181941400 Weak transcription Esophagus oesophagus
7 chr2:181913800-181938400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:181917200-181934200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:181917600-181934400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr2:181917600-181936800 Weak transcription NHLF lung
11 chr2:181917600-181937600 Weak transcription Fetal Thymus thymus
12 chr2:181917800-181934200 Weak transcription Psoas Muscle Psoas
13 chr2:181917800-181935600 Weak transcription Liver Liver
14 chr2:181918000-181938200 Weak transcription Rectal Smooth Muscle rectum
15 chr2:181919600-181934400 Weak transcription HUVEC blood vessel
16 chr2:181919800-181934000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:181919800-181934400 Weak transcription NHEK skin
18 chr2:181920000-181934400 Weak transcription A549 lung
19 chr2:181920200-181934200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:181920400-181934200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr2:181920800-181949800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:181921600-181934200 Weak transcription Fetal Muscle Leg muscle
23 chr2:181921600-181934400 Weak transcription Muscle Satellite Cultured Cells --
24 chr2:181922000-181942400 Weak transcription Fetal Intestine Large intestine
25 chr2:181922200-181937000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr2:181922800-181938200 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr2:181923000-181934200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:181923200-181932600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr2:181923400-181931600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr2:181923400-181936400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr2:181923600-181935600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr2:181924000-181937200 Weak transcription HSMMtube muscle
33 chr2:181925000-181934800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr2:181925400-181934800 Weak transcription Duodenum Mucosa Duodenum
35 chr2:181926200-181939600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:181926800-181934400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:181927000-181931600 Weak transcription Primary T cells fromperipheralblood blood
38 chr2:181927000-181934400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:181927200-181934200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:181928200-181934400 Weak transcription Osteobl bone
41 chr2:181928600-181942200 Weak transcription Dnd41 blood
42 chr2:181928600-181943000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr2:181928800-181933600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr2:181928800-181934200 Weak transcription Primary hematopoietic stem cells blood
45 chr2:181928800-181934200 Weak transcription HMEC breast
46 chr2:181928800-181936800 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr2:181929000-181934200 Weak transcription Small Intestine intestine
48 chr2:181929000-181934200 Weak transcription K562 blood
49 chr2:181929000-181937200 Weak transcription Brain Hippocampus Middle brain
50 chr2:181929000-181937400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015