Variant report

Variant rs1571709
Chromosome Location chr21:40553980-40553981
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:40539600-40554000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr21:40539800-40554000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr21:40540200-40554200 Weak transcription Psoas Muscle Psoas
4 chr21:40541200-40554000 Weak transcription Brain Substantia Nigra brain
5 chr21:40541600-40554000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr21:40541600-40554000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr21:40541600-40554000 Weak transcription Colon Smooth Muscle Colon
8 chr21:40541800-40554400 Weak transcription Brain Germinal Matrix brain
9 chr21:40542000-40554000 Weak transcription Rectal Smooth Muscle rectum
10 chr21:40542000-40554000 Weak transcription Stomach Mucosa stomach
11 chr21:40542400-40554400 Weak transcription Right Atrium heart
12 chr21:40542800-40554000 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr21:40543400-40554000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr21:40543800-40554000 Weak transcription Brain Cingulate Gyrus brain
15 chr21:40543800-40554000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr21:40543800-40554200 Weak transcription Right Ventricle heart
17 chr21:40543800-40554600 Weak transcription Left Ventricle heart
18 chr21:40544000-40554000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr21:40544000-40554000 Weak transcription Brain Anterior Caudate brain
20 chr21:40544200-40554000 Weak transcription Brain Hippocampus Middle brain
21 chr21:40544200-40554000 Weak transcription Colonic Mucosa Colon
22 chr21:40545600-40554200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr21:40546400-40554000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr21:40546400-40554000 Weak transcription Brain Angular Gyrus brain
25 chr21:40546400-40554000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr21:40546400-40554000 Weak transcription Esophagus oesophagus
27 chr21:40546400-40554000 Weak transcription Spleen Spleen
28 chr21:40546400-40554200 Weak transcription Lung lung
29 chr21:40546400-40554200 Weak transcription Ovary ovary
30 chr21:40546400-40554600 Weak transcription Gastric stomach
31 chr21:40548000-40554000 Weak transcription Pancreas Pancrea
32 chr21:40548400-40554000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr21:40548400-40554000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr21:40548400-40554400 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr21:40548400-40554600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr21:40548800-40554000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr21:40548800-40554000 Weak transcription Fetal Heart heart
38 chr21:40549200-40554000 Weak transcription Stomach Smooth Muscle stomach
39 chr21:40549400-40554000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr21:40550800-40554000 Weak transcription Primary B cells from peripheral blood blood
41 chr21:40551000-40554200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr21:40551200-40554000 Weak transcription Fetal Muscle Trunk muscle
43 chr21:40551200-40554000 Weak transcription Fetal Muscle Leg muscle
44 chr21:40551200-40554000 Weak transcription Thymus Thymus
45 chr21:40551400-40554000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr21:40551400-40554000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr21:40551400-40554000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr21:40551400-40554000 Weak transcription Fetal Kidney kidney
49 chr21:40551400-40554000 Weak transcription Fetal Stomach stomach
50 chr21:40551400-40554200 Weak transcription Aorta Aorta

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